LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr5g02576	ATGAGATACATGGCTGGTAGCAACGAAGTCAACCTCAATGAATCCAGGAGTGTCGTTCCGTTGAATACTTGGGTTCTTATCTCCAATTTCAAGCTGGCCTACAATCTACTCAGACGCGCCGATGGGACTTTCAATCGCAAGCTGGCCGAGTTCCTTGACCGGAAGGTGCCCTCCAATATAATTCCGGTCGACGGGGTATTCTCTTTCGACCATGTTGATCGAAACACCGGCCTCTTCAATCGAGTGTATCAACCTGCTCCAGAACATGAGTCTCAGTGGGGCATTATAGAGCTTGAAAGGCCCTTGAGCACGACCAGGATCGTCCCTGTCATAATTTTCTTCCATGGCGGAAGCTTCTCCCATTCATCTGCTAACAGTGCGATCTATGACACTTTCTGTCGGCGCCTTGTGAACATTTGCAAAGCAGTTGTGGTCTCTGTAAACTACCGCCGATCACCGGAGCATCGATATCCGTGTGCTTACGACGATGGCTGGGCTGCACTTGAATGGGTTAAATCAAGACCCTGGCTTCAGAGCGGAAAGGATTCCAAGGTTCATGTGTACTTGGCCGGCGATAGTTCAGGCGGTAACATCGTTCACCATGTGGCGGCGAAGGCTGCTGAGTCAGACATTGAAGTGTTGGGTAATATCCTGCTACATCCATTGTTTGGAGGACAGAAGCGAACAGAGTCGGAGAAGAAACTTGATGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTGCCAGAAGGAGAAGACAGAGATCATCCGGCATGCAATCCATTTGGCCCGAGAGGGAAGAGCCTTGTAGGACTCAAGTTCCCTAAAAGTCTCGTTTGTGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAACTGGCATATGTGGAAGGTCTCAAGAATTCAGGGCACGAGGTTAAACTTCTTTACCTAAAAGAGGCCACAATTGGGTTCTACTTCTTGCCAAATAATGATCACTTCTATTGCCTTATGGAGGAGATTAACCACTTCGTGAATTCTAACTGTTAA	1044	0.4789	MRYMAGSNEVNLNESRSVVPLNTWVLISNFKLAYNLLRRADGTFNRKLAEFLDRKVPSNIIPVDGVFSFDHVDRNTGLFNRVYQPAPEHESQWGIIELERPLSTTRIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYDDGWAALEWVKSRPWLQSGKDSKVHVYLAGDSSGGNIVHHVAAKAAESDIEVLGNILLHPLFGGQKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLVGLKFPKSLVCVAGLDLVQDWQLAYVEGLKNSGHEVKLLYLKEATIGFYFLPNNDHFYCLMEEINHFVNSNC	347

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g02576	347	FunFam	Gibberellin receptor GID1	4	345	-	-
	Accr5g02576	347	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative serine active site.	187	199	IPR033140	-
	Accr5g02576	347	Gene3D	alpha/beta hydrolase	1	345	IPR029058	-
	Accr5g02576	347	PANTHER	ARYLACETAMIDE DEACETYLASE	46	318	-	-
	Accr5g02576	347	Pfam	alpha/beta hydrolase fold	111	324	IPR013094	GO:0016787
	Accr5g02576	347	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	111	127	IPR002168	GO:0016787
	Accr5g02576	347	SUPERFAMILY	alpha/beta-Hydrolases	78	344	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g02576	Accr-Chr5	52119965	52121572	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g02576	4	345	Carbohydrate Esterase	AT3G63010	78.134	0.0	573

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g02576	K14493		-	qsa:O6P43_010685	645.58