Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02558 ATGACCATCTCTATGGTAATGAGCAGACATGTAACACAGACCCTTATCCTTAGTCCCCCCAGCGGTCGAAAATCGAATCTGATCACTATTCCACGGCAGAAAGAGAAGGTGGTGGTGGTCATTGGAGCCACCGGCACCGGAAAGTCCAGGCTCTCCATCGACCTGGGCACCCTTTTTCCCGCACAAATCATCAATTCCGACAAAATGCAAGTCTACGAAGGCCTTGACATAGTCACCAACAAAATCGCTAAGGAAGACCAACGAGGTGTGCCTCACCATTTGTTAGGAACAGAGAGCCCCAACTCAGAGTTCACAGCCTCCCACTTCCGTGATGCCGCTTTACTCGCCATCGAGTTAATTACATCTTCCGGACAGCTTCCGATCATCGTGGGAGGATCCAACTCATATATTGAGGCACTGATCGACGACGACGACTATAAATTCCGATCAAGGTATGATTTCTGTTGTCTCTGGGTAGACGTGTCATTGCCGGAGCTCGACCAATACGTGGCCAAACGGGTTGATCAAATGTTAGAGAGTGGAATGGTAGATGAACTGAGACCATTTTTCAATCCAAAGGGAGACTACTCTCGAGGGATTAGGAAAGCTATTGGAGTTCCAGAGTTCCATCAGTATTTTCGAAAGGAATCGTTTATTAGGGATGAAGGAATCAAGCAGATGTTACTGGAAGAAGCGGTGAATGCAATAAAGAAGAACACGCACAAATTGTCACGTAAACAACTGGGGAAGATTCAGAGACTGCGCGATGTGAAGAGATGGAAGATTCATCGGCTAGACGCCACAACCGTGTTCCGCAAGCATGGGGAAGAAGCAGAGGAGGCATGGAAGAAGGTGGTGGCAGAGCCAAGTGCTAGGATCGTAGCCAGGTTTCTTTACGATTTACCATCTGCGAATGTTGGCGCTGGCCTGAGACTGTCGTCATCTTCTTCGGTCCTGGAAAGCGCATGGCTACGGCAACGTGTTGATGAAGGGTTGGGTTTCTCTCCTCATCATTTTCTCTTCATCTCTCATAAGTTCTAA 1041 0.4813 MTISMVMSRHVTQTLILSPPSGRKSNLITIPRQKEKVVVVIGATGTGKSRLSIDLGTLFPAQIINSDKMQVYEGLDIVTNKIAKEDQRGVPHHLLGTESPNSEFTASHFRDAALLAIELITSSGQLPIIVGGSNSYIEALIDDDDYKFRSRYDFCCLWVDVSLPELDQYVAKRVDQMLESGMVDELRPFFNPKGDYSRGIRKAIGVPEFHQYFRKESFIRDEGIKQMLLEEAVNAIKKNTHKLSRKQLGKIQRLRDVKRWKIHRLDATTVFRKHGEEAEEAWKKVVAEPSARIVARFLYDLPSANVGAGLRLSSSSSVLESAWLRQRVDEGLGFSPHHFLFISHKF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02558 346 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 298 IPR039657 -
Accr5g02558 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 177 IPR027417 -
Accr5g02558 346 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 262 - -
Accr5g02558 346 Pfam IPP transferase 70 143 - -
Accr5g02558 346 Pfam IPP transferase 148 248 - -
Accr5g02558 346 Gene3D - 34 298 IPR027417 -
Accr5g02558 346 FunFam Adenylate isopentenyltransferase 5, chloroplastic 163 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02558 Accr-Chr5 51921437 51922477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02558 150 333 C2H2 Transcription Factor Family AT2G27760 31.280 2.33e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02558 K10760 - gmx:100803964 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01865 2 52775383 52776396 Accr5g02558 5 51921437 51922477 CCT
Accr5g02558 5 51921437 51922477 Accr5g02558 5 51921437 51922477 ECH