Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02547 ATGGCTGCGCCGCCTCTCTCTTCCACGCTTCAGCCCATGCTCCAGTCCGCCGTCCAATCGGTTCAGTGGACGTACTGTCTCTTCTGGCAACCTTGTCCCCAACAAGGGATTCTGGTGTGGGCGGATGGTTACTACAATGGGGCAATTAAGACTCGCAAAACAGTCCAACCAATGGAAGTTACTGCCGAGGAAGCCTCTCTCCAGAGAAGCCAGCAACTTAGGGAGCTCTACGAATCATTGTCGGCCGGAGAGACCAACCCTCCCGCTCGACGGCCTTGTGCCGCCTTGTCTCCTGAGGACCTCACCGAATCTGAATGGTTCTATTTGATGTGTGTCTCTTTCTCCTTTCCTCCTGGCGTCGGGTTACCGGGGAAAGCATATGCGAGGAGGCAGCATGTATGGCTTACCGGTGCGAACGAGGTCGACAGCAAAACGTTTTCAAGAGCTATTCTCGCCAAGAGTGCTCGCATACAGACCGTGGTGTGCATACCACTGTTGGACGGCGTCGTAGAGTTTGGCACAACAGATAAGGTTCAGGAAGACCTTAATTTTATCCAACATGTAAAGAGCTTCTTCATAGATCACCAGCGGCAGCACCACCCTCCTCCGCCGAAGCCCGCCCTCTCTGAGCACTCAACCTCCAACCCCACCACCTCTTCAGACCACTCCCGCTTCCAGTCCACGCCCATCCCCGCCGCCATGTACTCCGCTGTGGACCCATCACCGACCACCCCACCCGCTCCTGAAAACCAAATCAATGAAGATGACGACGACGATGATGAAGAAGAGGCCGAGTCCGACTCCGAGGCAGGAACAGCCCGGAACAGCGGCCCAACGTCTACGCCGGAGGCTTCAGGCGTGGCAGTTGCAACTGCAGCAGAACCAAGCGAGTTAATGCAGCTGGAGATGTCGGAGGATATCCGGGTAGGATCACCGGACGATGGCTCCAACAATCTCGACTCAGATTTCCATATGCTGGCGGTGAGCCACCCAGCGGATCACGAGCGACGGGCGGACTCGTACAGGGCCGAGTCGACCCGGAGGTGGGCCGAACCAATGCTCCAACTACCAGCTTCAGAAGGCGCTCAACTAGAAGAGCTCACACAAGAGGACACGCACTACTCTCAAACAGTGTCCACCATCCTCCACAATCAGTCTATCCGGTGGGCCGAATCTCCCTCCGTCGACTACATAACTTACTCCTCCCAATCCGCTTTTGCCAAGTGGAACACCCGTTCCGACCACCACCAACTCCTCCTCCAGCCGTCCCCCGACGGCACCTCTCAGTGGCTCCTCAAGTACATTTTGTTCACCGTTCCTTTCCTTCACGCCAAGTACCAAGACGACAACCCCCCCACGCCCCGAGATGGCGCCGATCCCGTCACGCGCCTACGTGGAAGGGGAACGCCGCAGGATGAGCTAAGCGCCAACCACGTACTGGCCGAGCGCCGCCGCCGCGAGAAGCTCAACGAGAGGTTCATCATATTGAGATCTCTCGTGCCCTTCGTCACAAAAATGGACAAGGCATCCATATTAGGGGACACCATCGAGTATGTGAAACAGTTGCGCAAAAAGATCCAAGATCTGGAGGCGTGTAACCGCCAGATGGAAGCAGAGCAACAACAGTCAAGGGAGCAACAGAGGAGCTTGACGAGAGTTGGGTCGGACAAGAGGAAGATGAGGATCGTGGAGGGGAGCGGAGGGATAAGGAAGCCGAAGTCAGTGGAGGCGTCACCGCCGCCATCGCCATCGGGAATGGTGACTTCGGTGCAAGTGTCGATCATAGAGAGCGATGCACTGTTGGAATTGGAGTGCGAGAACAGGGAAGGGTTGTTGCTGGATGTGATGCAAATGCTGAGAGAGATGAGGATAGAGGTGACGACGGTGCAGTCGTCGCTGAACAACGGGGTGTTCGTGGCGGAGCTGAGGGCGAAGGTGAAGGAAAATCCGAACGGAAAGAAGACCAGCATAGTTGAAGTGAAGAGGGCCCTCAACCAAATCATACCCCACAATGATTGA 2019 0.5617 MAAPPLSSTLQPMLQSAVQSVQWTYCLFWQPCPQQGILVWADGYYNGAIKTRKTVQPMEVTAEEASLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAKSARIQTVVCIPLLDGVVEFGTTDKVQEDLNFIQHVKSFFIDHQRQHHPPPPKPALSEHSTSNPTTSSDHSRFQSTPIPAAMYSAVDPSPTTPPAPENQINEDDDDDDEEEAESDSEAGTARNSGPTSTPEASGVAVATAAEPSELMQLEMSEDIRVGSPDDGSNNLDSDFHMLAVSHPADHERRADSYRAESTRRWAEPMLQLPASEGAQLEELTQEDTHYSQTVSTILHNQSIRWAESPSVDYITYSSQSAFAKWNTRSDHHQLLLQPSPDGTSQWLLKYILFTVPFLHAKYQDDNPPTPRDGADPVTRLRGRGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEACNRQMEAEQQQSREQQRSLTRVGSDKRKMRIVEGSGGIRKPKSVEASPPPSPSGMVTSVQVSIIESDALLELECENREGLLLDVMQMLREMRIEVTTVQSSLNNGVFVAELRAKVKENPNGKKTSIVEVKRALNQIIPHND 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02547 672 MobiDBLite consensus disorder prediction 270 286 - -
Accr5g02547 672 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 473 522 IPR011598 GO:0046983
Accr5g02547 672 MobiDBLite consensus disorder prediction 565 587 - -
Accr5g02547 672 Coils Coil 519 549 - -
Accr5g02547 672 MobiDBLite consensus disorder prediction 195 289 - -
Accr5g02547 672 MobiDBLite consensus disorder prediction 446 476 - -
Accr5g02547 672 PANTHER TRANSCRIPTION FACTOR TT8 7 670 - -
Accr5g02547 672 SMART finulus 479 528 IPR011598 GO:0046983
Accr5g02547 672 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 475 546 IPR036638 GO:0046983
Accr5g02547 672 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 192 IPR025610 -
Accr5g02547 672 MobiDBLite consensus disorder prediction 210 230 - -
Accr5g02547 672 Gene3D - 474 548 IPR036638 GO:0046983
Accr5g02547 672 Pfam Helix-loop-helix DNA-binding domain 476 523 IPR011598 GO:0046983
Accr5g02547 672 MobiDBLite consensus disorder prediction 251 267 - -
Accr5g02547 672 Gene3D - 598 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02547 Accr-Chr5 51832553 51838682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02547 308 671 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 40.162 6.13e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g02547 bHLH-MYC_N 1.3e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02547 - - zju:107426439 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02547 5 51832553 51838682 Accr5g02547 5 51832553 51838682 ECH