Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02534 ATGAGGGAGGGGCTTAGATCTCGGAAGCGATTCGAGAAGCCGGAGACCGACGAGGTTTCTGGAATTGGAGGATTTCAAAAGAAAGGAAGCGTAATAAAACAGGATGTTCATGATTCTAGTGGTGTGGATTCTTCGAATGAGAGAGAACCTTTGGACTTGGAAGCTGCGAATAAAGAAGTGGACAAAGTAGCGAAAGAGTGTGAACTGGACTGTGATATGGGGACTGGGACGAATATTGGGTTAGTCGAGAATGAGAACAATGGAAAGGTTTTAAATTGTGTAGATAACATTGAGACGAAGGTGAAGAAGGAAGGGGACTCAAATGATAAATTGCATATAGTTGGTCGAGTATTGCGCTCACAGTTGAAGAGGGATGATGGTAAGAAATCTATTAAGGAAGATAACGCTGTTGTGGTGGTGAGGAAAAGTAGAGAGTCTGATGAGTCTAAGAAGATACAGGTTAAGGCACAGGAGGTAGAGACCCATGAACGTGTTACTAGTGGTTATGAGGAGAAGAAACTTAAGGAAGGCACTGGCAAACAGAAATTGAAACGAAAGCGTGGGAGGCCCCCCAAAACAGAGATGACAATGCAGGTAGAGGAGACCTATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGATTAAGGAAGGCACTGGCAAGCAGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAAACAGAGATGACAATGCAGGTTGGTGGTTTTCCACGGAAGCCAGGGAGGCCACCCAAGGCTGGGCAAAATCATAAACTTATCACAGTGGGATGTAGTAAAAATAGAAAGCTGGGCTTTCATAAAGCTAAAAAAAGTTTAACTATTAGAGAGGGTGCCTGTAGAAGTCCAACTAAACTATACTCAAAGAGACCCTTTGTGAAGAAATTAGAAGTAAATTTTTCTCATATCAAACCTGAGAACAATGTTGGAGCATCACCATTGAGATCAAATTCTTTAAATGTTCCTGTTGCCAAGAAAAGGAAAAAGAATAAAGCAAAGCAGTTGGTGAGGGACCAGATAATGGAACAGCTCATGGCTGCAGGCTGGACAGTTGACTATAGACTTAGAAATGGCAGAGATTACAGTGATGCAGTATATGTTAGTCTAGACGGAAGGACCCACTGGTCAATTACCTTGGCCTACAATAGGCTGAAGAAGCATTATGAAAATGGTGATGGTGAAGGCAAGGTGTATGGACCAGGTTTTAAATTCACACCTATACCTGAAGAAAAATTTAAAACATTAACTAAGGTGATCAGCAAGCAAAGAAAAGACAAAAAGAAATCAAAAGAGAAAGGGAAGAAGGATGGAGAAAAGGTTAGTGGAGCTAATAAAAAGGGAAAAAAGGGGAAGAAGAAGAGGAAAGAGTCATTTATTGAGCAGGATCATTCTGATATTGCATCACCTAGAAGAATGTCGATTCCGTTTAAGGATCATAAGCGACAGAAAACTCAAAACTCAAAACTCGAGAGAGAGGTAGATTCAGAAGTTGATGGATATGTTCCTTACAATGGAAAACGTACTCTACTTGCCTGGATGATTGATATGGGAATGGTCTTGCAAAATGGGAAGGTTCATTACATGAGCCATGTAAGAAAAGGTGTGGCATTGGAGGGCAGGGTAACAGGAGATGGCATTCACTGCGGCTGCTGTGATGAAATCATAACAATATCGGAGTTTGAAGCCCATGCAGGAAGCGAACTCTCTGATCCATTTAGAAATATATATACAGAGGGAGGAATTTCTCTCTTGCAGTGCCTGCTAGATTCGTGGAATAAACAAGATGAATCTGAACGTAAAGGTTTTCATTTTGTTGATGTTGCTGGTGAAGACCCTAATGATGACACTTGTGGTGTCTGTGGGGATGGCGGGGACCTGATATGTTGCGATAGTTGCCCATCAACATTCCATCAAAGCTGCGTGGGTATGAAAAAGTTTCCATTTGGTGATTGGCATTGCATTTATTGCTGTTGCAAATTTTGTGGTTTGGTCAGAAGTGCAAGCAAAAGGGATGGTGATGCTGATATTACTGAGTTCGCAACATTTACATGCCACTTATGTGGACAACAATATCACAGATCCTGTATTGAGGTGGATTGTGCCCAGATTGATGATTCCTTTGTTGCATTTTGTGGAAACAGATGTCAAGAGTTACATGAGAGACTCAATTTGCTTGTTGGGATCAAACATGAAATTGAAGATGGATTTGCCTGGACTTTAATTAAGCGATCCGATGTTGGCTCAGATGCTTCTAAGATTAAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCAGTTGCTGTATCGATAATGAACGAGTGTTTTAAGCCTTATATTGATCATAGAAGTGGGATTAATATGATCCACAGTATTCTTTATAATTGTGGCTCAAACTTCAACCGCCTGAACTATAGGGGATTTTTTACTGCCATTCTAGAGAGGGGAGATGAAATTATCTGCACTGCATCTATTAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCAGGTCTATGTATAGGCGGCAAGGAATGTGCCGTCGTCTCCTAAATTCCATTGAAGATGCACTCAGCTCTCTGAATGTAGGGTTATTGGTAATACCAGCTGTAGCAGAAGTCAGAGAAACTTGGACTTCAGTTTTTGCGTTTGAGCCACTTGATCCGACAAGCAAACAAATGGTAAAGAACTTAAATTTGTTGGTGTTCCCTCATGTAGATATGTTACAGAAAAAGATACCAAAGCCTACTTCTGCTGAAGAAAATCTGACTCCTGCTGAAGTTTCCAATCCTGAACTTCCCGAGAATATATGTCATGAGTTGGGTTCTTCTGGAACTGAAGTGATCGTTTCTGCTACGGATAACCCATCAAGCCAAAGCTCAGGGTCTGAGAAGGGAAGTCAATATCTCACAAAATCAGATGAGATAGTAACACATAGAAATGGTGATGAGGATTCTCCGTGCCTCTCGTCTGAAAATATTCCTCACAGATCTGAGATTGTGTCTTGTATGAGGGAATCCAAAGATTCTGAAATCGCATATGATAATTTGAAAAGTGTAACCCCGTTGGAAGATAATGACGGAACTTTGCATCCTGAGTCTCTGGAATTCCAGTTGGCTGAATCTGTTTTTGGTTCACTTAAAATTTCCAACAGTTGTGAACCGACAAGTGACCATGACTTTGTTCGGCATCATTCGGTAGAATCTAAAGAATTGCTTGCTGTGGATTTACCCGTTAATTGCATTAAACCGTCCAGCGTGGTCAGTGAGCTAAATGCTGATGAAGTTTGTGCAGCCAAGACATCCAGTCTCCAGACTGACACAAATTCTGGAGATTGCCAATCCGTACAAGCGGCTTCAGGTTCTGCTGAGGATATTTTGAATGGCGTCAATGTTAACAGTGAATTGTCTAGTGTAGCTGAGTTCAATTTGCTTCCAGCTGATAAGAAGTTAGTTCTCATTAATAACCGTTGGACTGACCACCCTTCGGAGCTGCTAGATCCTGGTTTAAAGGTTGAGAGAACTGCGCAGTGTAATGGTTCATCTCTGCGTAGCCCAAACACTACTGGCGTGGCTCTTCACTGCGCATCTGCTGGTGGCACTGAGGTATGA 3636 0.4189 MREGLRSRKRFEKPETDEVSGIGGFQKKGSVIKQDVHDSSGVDSSNEREPLDLEAANKEVDKVAKECELDCDMGTGTNIGLVENENNGKVLNCVDNIETKVKKEGDSNDKLHIVGRVLRSQLKRDDGKKSIKEDNAVVVVRKSRESDESKKIQVKAQEVETHERVTSGYEEKKLKEGTGKQKLKRKRGRPPKTEMTMQVEETYECVSSGYEEKKIKEGTGKQKLKRKRGRPPKTEMTMQVGGFPRKPGRPPKAGQNHKLITVGCSKNRKLGFHKAKKSLTIREGACRSPTKLYSKRPFVKKLEVNFSHIKPENNVGASPLRSNSLNVPVAKKRKKNKAKQLVRDQIMEQLMAAGWTVDYRLRNGRDYSDAVYVSLDGRTHWSITLAYNRLKKHYENGDGEGKVYGPGFKFTPIPEEKFKTLTKVISKQRKDKKKSKEKGKKDGEKVSGANKKGKKGKKKRKESFIEQDHSDIASPRRMSIPFKDHKRQKTQNSKLEREVDSEVDGYVPYNGKRTLLAWMIDMGMVLQNGKVHYMSHVRKGVALEGRVTGDGIHCGCCDEIITISEFEAHAGSELSDPFRNIYTEGGISLLQCLLDSWNKQDESERKGFHFVDVAGEDPNDDTCGVCGDGGDLICCDSCPSTFHQSCVGMKKFPFGDWHCIYCCCKFCGLVRSASKRDGDADITEFATFTCHLCGQQYHRSCIEVDCAQIDDSFVAFCGNRCQELHERLNLLVGIKHEIEDGFAWTLIKRSDVGSDASKIKSQMVECNSKLAVAVSIMNECFKPYIDHRSGINMIHSILYNCGSNFNRLNYRGFFTAILERGDEIICTASIRIHGNQLAEMPFIGTRSMYRRQGMCRRLLNSIEDALSSLNVGLLVIPAVAEVRETWTSVFAFEPLDPTSKQMVKNLNLLVFPHVDMLQKKIPKPTSAEENLTPAEVSNPELPENICHELGSSGTEVIVSATDNPSSQSSGSEKGSQYLTKSDEIVTHRNGDEDSPCLSSENIPHRSEIVSCMRESKDSEIAYDNLKSVTPLEDNDGTLHPESLEFQLAESVFGSLKISNSCEPTSDHDFVRHHSVESKELLAVDLPVNCIKPSSVVSELNADEVCAAKTSSLQTDTNSGDCQSVQAASGSAEDILNGVNVNSELSSVAEFNLLPADKKLVLINNRWTDHPSELLDPGLKVERTAQCNGSSLRSPNTTGVALHCASAGGTEV 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02534 1211 MobiDBLite consensus disorder prediction 1 17 - -
Accr5g02534 1211 PANTHER PHD FINGER PROTEIN 12 326 1019 IPR042163 GO:0003714|GO:0045892
Accr5g02534 1211 SMART PHD_3 622 663 IPR001965 -
Accr5g02534 1211 SMART PHD_3 664 722 IPR001965 -
Accr5g02534 1211 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 811 877 IPR016181 -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 40 55 - -
Accr5g02534 1211 SUPERFAMILY FYVE/PHD zinc finger 615 669 IPR011011 -
Accr5g02534 1211 CDD NAT_SF 817 876 - -
Accr5g02534 1211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 612 736 IPR013083 -
Accr5g02534 1211 PRINTS AT-hook-like domain signature 223 234 IPR017956 GO:0003677
Accr5g02534 1211 PRINTS AT-hook-like domain signature 184 194 IPR017956 GO:0003677
Accr5g02534 1211 PRINTS AT-hook-like domain signature 242 252 IPR017956 GO:0003677
Accr5g02534 1211 ProSiteProfiles Zinc finger PHD-type profile. 620 665 IPR019787 -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 163 178 - -
Accr5g02534 1211 CDD PHD2_CHD_II 623 662 - -
Accr5g02534 1211 Pfam Tify domain binding domain 545 594 IPR032308 -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 216 257 - -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 958 978 - -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 460 497 - -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 1 55 - -
Accr5g02534 1211 MobiDBLite consensus disorder prediction 425 497 - -
Accr5g02534 1211 SMART AT_hook_2 184 196 IPR017956 GO:0003677
Accr5g02534 1211 SMART AT_hook_2 225 237 IPR017956 GO:0003677
Accr5g02534 1211 SMART AT_hook_2 244 256 IPR017956 GO:0003677
Accr5g02534 1211 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02534 Accr-Chr5 51654750 51664431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02534 182 939 PHD Transcription Factor Family AT5G36670 42.013 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02534 - - lang:109346644 1048.5