Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02505 ATGGCCAATAATCCATCCGAGGCTCCCACCGACGACTTCTTTGAACAAATCCTCGGCCTCCCAACTTTCGCTTCCATTGACTCCGGCTTGGCCGGAGCTGATGGTGGCTTGGCCGGTTCGGCTTCTCCGGCTCACAAGATGCTTCAGCTCAACTCCAGCGACGCCACCGGCCACCCCTCTGCCGTTGGTGCTGCGGGCGGTGCTGGTTTTCATGGGCCAGTATACCAGTTAGGCCTCAGTTTGGACCAAGGAAAAGGAGCAAGTTATTTTAAATCCGAGGAGGCTTCGGAGAGTGGAAAGCTCTTTCACGATGACGTCGTTGATGGTCGAACTAAGAATGAAGCATTTTCTCTTAAGGATCAAATGAACTGTTTTCAGGTTTTTCATGGGCAGTCTATGCCATCTACCCTTCCTGCTTCTTTGCAGCCCCCAACAATGCGACCGAGGGTGCGGGCTCGAAGAGGACAGGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGGATTAGGGCCCTGCAGGAATTGGTTCCCAGTGTTAATAAGGCAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGACTTCAAGTGAAGGTTCTGAGTATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCACCACTCGTGACTGACATCCCATTATCATCGGTTGAGGAAGATGGAAGTGAAGGTGGAAGAAATCAAGCAATATGGGAGAAGTGGTCGAATGATGGCACAGAAAGACAAGTAGCCAAGCTTATGGAGGAAAATGTTGGAGCTGCCATGCAATTCCTTCAATCAAAGGCGCTCTGCATAATGCCGATCTCGCTCGCCTCTGCGATATACCACTCACAGCCACCAGACACCTCAAGCATAGTAAAGTCAGAGACTAATCCTCCTCCATAG 939 0.5037 MANNPSEAPTDDFFEQILGLPTFASIDSGLAGADGGLAGSASPAHKMLQLNSSDATGHPSAVGAAGGAGFHGPVYQLGLSLDQGKGASYFKSEEASESGKLFHDDVVDGRTKNEAFSLKDQMNCFQVFHGQSMPSTLPASLQPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKADRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGGRNQAIWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02505 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Accr5g02505 312 FunFam Basic helix-loop-helix transcription factor 151 213 - -
Accr5g02505 312 SMART finulus 162 211 IPR011598 GO:0046983
Accr5g02505 312 Pfam Helix-loop-helix DNA-binding domain 161 205 IPR011598 GO:0046983
Accr5g02505 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 215 IPR036638 GO:0046983
Accr5g02505 312 Gene3D - 151 213 IPR036638 GO:0046983
Accr5g02505 312 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 291 - -
Accr5g02505 312 MobiDBLite consensus disorder prediction 135 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02505 Accr-Chr5 51355309 51358837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02505 70 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.694 8.91e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g02505 HLH 1.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02505 - - pcin:129304759 509.99