Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02504 ATGGCCAATAATCCATCCGAGGCTCCCACCGACGACTTCTTTGAACAAATCCTCGGCCTCCCAACTTTCGCTTCCATTGACTCCGGCTTGGCCGGAGCTGATGGTGGCTTGGCCGGTTCGGCTTCTCCGGCTCACAAGATGCTTCAGCTCAACTCCAGCGACGCCACCGGCCACCCCTCTGCCGTTGGTGCTGCGGGCGGTGCTGGTTTTCATGGGCCAGTATACCAGTTAGGCCTCAGTTTGGACCAAGGAAAAGGAGCAAGTTATTTTAAATCCGAGGAGGCTTCGGAGAGTGGAAAGCTCTTTCACGATGACGTCGTTGATGGTCGAACTAAGAATGTTTTTCATGGGCAGTCTATGCCATCTACCCTTCCTGCTTCTTTGCAGCCCCCAACAATGCGACCGAGGGTGCGGGCTCGAAGAGGACAGGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGGATTAGGGCCCTGCAGGAATTGGTTCCCAGTGTTAATAAGGCAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGACTTCAAGTGAAGGTTCTGAGTATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCACCACTCGTGACTGACATCCCATTATCATCGGTTGAGGAAGATGGAAGTGAAGGTGGAAGAAATCAAGCAATATGGGAGAAGTGGTCGAATGATGGCACAGAAAGACAAGTAGCCAAGCTTATGGAGGAAAATGTTGGAGCTGCCATGCAATTCCTTCAATCAAAGGCGCTCTGCATAATGCCGATCTCGCTCGCCTCTGCGATATACCACTCACAGCCACCAGACACCTCAAGCATAGTAAAGTCAGAGACTAATCCTCCTCCATAG 900 0.5111 MANNPSEAPTDDFFEQILGLPTFASIDSGLAGADGGLAGSASPAHKMLQLNSSDATGHPSAVGAAGGAGFHGPVYQLGLSLDQGKGASYFKSEEASESGKLFHDDVVDGRTKNVFHGQSMPSTLPASLQPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKADRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGGRNQAIWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02504 299 Pfam Helix-loop-helix DNA-binding domain 148 192 IPR011598 GO:0046983
Accr5g02504 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Accr5g02504 299 SMART finulus 149 198 IPR011598 GO:0046983
Accr5g02504 299 MobiDBLite consensus disorder prediction 115 129 - -
Accr5g02504 299 FunFam Basic helix-loop-helix transcription factor 138 200 - -
Accr5g02504 299 Gene3D - 138 200 IPR036638 GO:0046983
Accr5g02504 299 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 278 - -
Accr5g02504 299 MobiDBLite consensus disorder prediction 115 147 - -
Accr5g02504 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 202 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02504 Accr-Chr5 51355309 51358837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02504 70 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 77.447 1.01e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g02504 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02504 - - pcin:129304759 519.235