Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02502 ATGGAGAGTCCAACAATATCAATAGGTGAGCTGAACCTACAGGACACAGAGCTAAGGCTTGGATTGCCAGGCAGCGATGAGCCAGAAAAACGTTGCAATGTTGGAAGCAAAAGGAAATGTTCACCTGAGGAGGAATCAACAGGCAATAGAAGTGACGCTAAAAGTGATCATAACCAGTCAGACAATAATGGCCCACCAGCAAAGGCACAAGTAGTGGGGTGGCCACCAGTGAGAAGTTTCAGGAGGAACAGTGTGCAACAGAAGAAGGAGGAAGAGGGTGGGAGGTACGTGAAAGTGAGCATGGCTGGTGCAGCTTACTTGAGGAAGATAGATTTGAAGGTTTATAAGAGCTACCCCCAAGTCCTAAAGGCCTTGGAAAACATGTTCAAGTGCACTTTCGGAGAATATTCAGAGAGGGAGGGATACAATGGATCGGAGTATGTTCCCACGTATGAAGACAAAGAGGGAGACTGGATGCTTGTTGGAGATGTTCCATGGGACATGTTCACATGCTCCTGCAAGAGGCTCAGAATCATCAAAGCATCTGAAGCTAAGGGTTTGGGTTGTCTATGA 573 0.4695 MESPTISIGELNLQDTELRLGLPGSDEPEKRCNVGSKRKCSPEEESTGNRSDAKSDHNQSDNNGPPAKAQVVGWPPVRSFRRNSVQQKKEEEGGRYVKVSMAGAAYLRKIDLKVYKSYPQVLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKEGDWMLVGDVPWDMFTCSCKRLRIIKASEAKGLGCL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02502 190 ProSiteProfiles PB1 domain profile. 94 186 IPR000270 GO:0005515
Accr5g02502 190 Pfam AUX/IAA family 40 188 IPR033389 -
Accr5g02502 190 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 185 IPR003311 GO:0005634|GO:0006355
Accr5g02502 190 FunFam Auxin-responsive protein 89 190 - -
Accr5g02502 190 Gene3D - 88 190 - -
Accr5g02502 190 MobiDBLite consensus disorder prediction 17 76 - -
Accr5g02502 190 SUPERFAMILY CAD & PB1 domains 91 179 - -
Accr5g02502 190 MobiDBLite consensus disorder prediction 22 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02502 Accr-Chr5 51343142 51343830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02502 83 187 B3 DNA Binding Superfamily AT2G46530 36.792 1.54e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr5g02502 AUX_IAA 5.6e-54 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02502 K14484 - gmx:100780752 271.552