Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02479 ATGGAATTCAGAAATGCAGAAGATTCCAGAAGCTCCAGCGACGAAACCGATGATACGACAGGGATTGGAAGATCCTACGAGTGCGTGTTTTGCAAGAGAGGCTTCACTACAGCACAAGCTTTGGGAGGACACATGAATATACACAGGAAGGATAGAGCCAAAACCAAGCCCAGTAATAATATTGGTCCTTCATCTTCAACCAAACTTGTGGATCTAGGTTTCTATTCTGCACGTACTACTACTAGTCCTGGAAATTACTACTTAACACCTACTCCTCCTGATGAGGTAGATAGTAATTGCCCTCAATTTTATCATTCCAGTAGTACAAGCAGATCTTCTTCTTCGCATGTACCAGATTGGAGGACCAGAAGCTTGAGCTTGTATACCAATCCTTTCTGCGTCGTACGCGACAAGATACAAGACGACATGTCAGAGGATGGCCTGGATTTGGAGCTTCGACTGGGTTATCACCCATAG 477 0.4444 MEFRNAEDSRSSSDETDDTTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSNNIGPSSSTKLVDLGFYSARTTTSPGNYYLTPTPPDEVDSNCPQFYHSSSTSRSSSSHVPDWRTRSLSLYTNPFCVVRDKIQDDMSEDGLDLELRLGYHP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02479 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Accr5g02479 158 MobiDBLite consensus disorder prediction 1 20 - -
Accr5g02479 158 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Accr5g02479 158 Gene3D Classic Zinc Finger 8 72 - -
Accr5g02479 158 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Accr5g02479 158 PANTHER OS07G0101800 PROTEIN 7 157 - -
Accr5g02479 158 Pfam C2H2-type zinc finger 26 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02479 Accr-Chr5 51134716 51135192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02479 4 57 C2H2 Transcription Factor Family AT3G09290 54.237 2.14e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr5g02479 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02479 - - pcin:129304518 215.312