Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02477 ATGACTGGCTCTGGATCTCCTTGTGGAGCCTGCAAATTCTTGAGGAGGAAATGTGTAAGAGGGTGTGTATTTGCACCATACTTCTGCCATGAGCATGGAGCTAGCCACTTTGCAGCGATTCATAAGGTGTTTGGTGCAAGCAATGTTTCCAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGGAGCGAAGCTGCCGTCACCATCTCCTACGAAGCTCAGGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCTCATATCTTCGCCCTCCAGCAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTGAGGGAACAAGCAGCTCAAAGCTTTCACACTGAAAACCCTAATGAAAAGTGCTGTGGAAAACCTACTACTGCTACTAATTTCCCTCACGATCTTCATGGTTGGTTCCAGAGCCAAAATTCCGACACGGCAGAGCCTCATCATGAGTTTCTTCCAAACATGTCTAATAATTATGGGAGCAGCAGCAGCAATCCTTTCATGAATCTAAACCCTATGGGGAATAATAATGAAGAAAGCATGTCATTTTCTAGCTTTGATGAGACTGCTTCTAATAATAACTCCATGTCCTATGACGTCATGCAAGCAAACAGCAAGATCTGGAGCTTTCATGAAGTGGACGACCTTCAGTCGGTGGCTTTCGGTTTCTGCCGATCGGCTTCATGA 693 0.4646 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEHGASHFAAIHKVFGASNVSKLLAHLPVSDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQSFHTENPNEKCCGKPTTATNFPHDLHGWFQSQNSDTAEPHHEFLPNMSNNYGSSSSNPFMNLNPMGNNNEESMSFSSFDETASNNNSMSYDVMQANSKIWSFHEVDDLQSVAFGFCRSAS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02477 230 Coils Coil 87 107 - -
Accr5g02477 230 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Accr5g02477 230 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 197 - -
Accr5g02477 230 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02477 Accr-Chr5 51116504 51117290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02477 7 225 AS2 family AT3G58190 51.111 1.60e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr5g02477 LOB 1.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02477 K13945 - gmx:100776678 289.271