Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02472 ATGGCCACGAACATGCGTCAATTGCTCAAAAGTATCTGTTTAAATACTGATTGGAAGTACGCCGTCTTTTGGACACTCCAACAAGGGGGTCGGATGATCCTGACATGGGAGGATGGTTACTATGACATCCCTGATGATCATGATTCTTTAGCTAATGAGTGCTGCCAAAAGACCATGAAACAGTTTGACAGTGGGCATTTTTCCCACGACCCTCTTGGGTTGGCGGTGTCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGTATTGTTGGGCAGGTTGCTCTCACTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCGACAAGTTCTGGTTTTTCCTTTGAGTCTGCTGATGGATGGCTGTCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTAGCTATTACCCCACATGGAGTTGTTCAACTTGGCTCCTTAAATAAAGTGATTGAAGATACGAGAGTTATAACTCATATCAGAAATATTTTTTTGGCCAGTCAAGATTACTCGATAGCCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTTCGTCGCCAGATGTACCAACAACAAAACTGTGTTCAAAAATTGGACCTGCTTGCTTACATGATACAGAGGAAACCATAGGGGGTGAAAAACTGGATACTTTAGTGCCCTTTCCATGCTCTGCGGAGAACCTTCCACCTCCATCTGTTTGTCAGAAAATGGCTGTTGATGTGACCAGATATGGATGGCCCGAGTTTTGCAGTGATGGAAGTTCGGTTTTGCTTAAGTCAGCATCAAATATGATGAATGTGGAGCATCAGAAATTTTTAGATATGAGACCTCTAAATGAGAAGTTTGAAGGGGGATGTAGTGGCTCCAAAGATATTAGGGTGGAATCAGAAAAAAATGTTACATCATTGCTACGCAATTTGGTTATGGACAATAACTTCAGTGATTCTGTAGGTCCATCTGAAAAAATTGGAACTGATTTGGTTTGCTTGCCTTCAGCCATTCATGATGGTTATGAAGGTGATATTAACCAGAAAGAGGCATTGACTCTTCCTAGATCTTCAGATGCAAGCTCCCAAAAAGATACTATAAAGTCAGAGTTTCAGTCTGCACCTTCTTACAGGAGTACCTCAAACGCATCGCTGAAATTTCCTGCTGGCTGTGAGCTACTTGAAGCCCTTGGACCGGCTTTTGTTAAAAGTGGATACTTTGATCCAGAGGGGCAGGGGAATGAGGATGTTACAATGATGGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTCATGAATCTCATCCGGAGCATCTTTTGGAAGCAATAGTAGCCAATGCTTGTCATAGTAATAATGACATTAAGAGTGAACTATCATACTCTGCATCTGTGCAGTCTGCAACGATATCCGAAAGAAATCCTGAAGCTTTCATGCACACTTCCCCTACTATTAATTCAGAGGGCTATTCAATAGAGTCTTCTCTTGTAAGAGAGGACATATTCCACTCTTTGACTTCATCGTCATGTCCTAGTTCATGTAGCGAACGGTTTGAAAGATCTTCTGAAACTGGTAAGAGCAAGAAGAGGGCTAGGCCTGGAGAAAGTGGTAGGCCTAGGCCACGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACGATAAAGCACATGCTCTTTCTGCAGAGCATTACCAAGCATGCTGACAAGCTAAATAAATTTACTGGTTCAAAGACAAAGTTACATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGCTATGAACAGGGGTCGAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTCAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCTGAAGCCATAAGGAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCATAGTGAGAAGACATGGATATGTTTTGTTGTTGAGGGGCAAAACAACAGAAATGTACACAGATTGGATATATTGTGGCCACTTGTTCAAATACTGCAGTCCAAGAGTACAATGCATGCATAA 2157 0.4228 MATNMRQLLKSICLNTDWKYAVFWTLQQGGRMILTWEDGYYDIPDDHDSLANECCQKTMKQFDSGHFSHDPLGLAVSKMSYHVYSLGEGIVGQVALTGKHQWIYADDHATSSGFSFESADGWLSQFSAGIRTIVVVAITPHGVVQLGSLNKVIEDTRVITHIRNIFLASQDYSIAHVPNHIQCSVKNSSSSSPDVPTTKLCSKIGPACLHDTEETIGGEKLDTLVPFPCSAENLPPPSVCQKMAVDVTRYGWPEFCSDGSSVLLKSASNMMNVEHQKFLDMRPLNEKFEGGCSGSKDIRVESEKNVTSLLRNLVMDNNFSDSVGPSEKIGTDLVCLPSAIHDGYEGDINQKEALTLPRSSDASSQKDTIKSEFQSAPSYRSTSNASLKFPAGCELLEALGPAFVKSGYFDPEGQGNEDVTMMEMPDEISCSQLTHESHPEHLLEAIVANACHSNNDIKSELSYSASVQSATISERNPEAFMHTSPTINSEGYSIESSLVREDIFHSLTSSSCPSSCSERFERSSETGKSKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFTGSKTKLHHLESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAHSEKTWICFVVEGQNNRNVHRLDILWPLVQILQSKSTMHA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02472 718 MobiDBLite consensus disorder prediction 356 384 - -
Accr5g02472 718 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 546 589 IPR036638 GO:0046983
Accr5g02472 718 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 533 582 IPR011598 GO:0046983
Accr5g02472 718 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Accr5g02472 718 MobiDBLite consensus disorder prediction 521 546 - -
Accr5g02472 718 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 716 IPR043561 GO:0003700|GO:0006355
Accr5g02472 718 MobiDBLite consensus disorder prediction 515 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02472 Accr-Chr5 51051734 51057206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02472 1 714 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.261 6.15e-156 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02472 - - ccaj:109796613 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01978 2 54343855 54349212 Accr5g02472 5 51051734 51057206 CCT
Accr5g02472 5 51051734 51057206 Accr5g02472 5 51051734 51057206 ECH