Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02470 ATGGAAGACGGCAATGGAAGGTCAAGTGTTCATGGTGAGGTGAGATACAGAGGGATCCGGAGGAGGCCCTGGGGCAAATTTGCTGCTGAGATCCGTGACCCGACCCGCAAGGGAACTCGCATTTGGCTTGGAACCTTCGAGACCGCTGAGGAGGCTGCCAGGGCTTACGACGCCGCCGCCTTTCATTTCAGGGGCCACCGCGCTATTCTCAATTTCCCCAACGACCATCACTCTCTTCATCCTCCTTCTTCGTCACTGCCCCTGCCCTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCGAGAATTCCGCCGTCAGATGCCGACGGTGCCGTGGAGTTTGAATACTTGGACAACAACTTGCTGGATGAACTCCTCCAACAACAAGTTCACGCCCACCCTAACTTCCCCAAGTGA 417 0.5612 MEDGNGRSSVHGEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNDHHSLHPPSSSLPLPSSSSSSSSSSSSRIPPSDADGAVEFEYLDNNLLDELLQQQVHAHPNFPK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02470 138 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Accr5g02470 138 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Accr5g02470 138 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Accr5g02470 138 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Accr5g02470 138 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Accr5g02470 138 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Accr5g02470 138 FunFam Ethylene-responsive transcription factor 2 14 74 - -
Accr5g02470 138 MobiDBLite consensus disorder prediction 72 109 - -
Accr5g02470 138 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Accr5g02470 138 PANTHER DNA-BINDING DOMAIN 15 127 IPR044808 GO:0003700|GO:0009873
Accr5g02470 138 MobiDBLite consensus disorder prediction 77 105 - -
Accr5g02470 138 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02470 Accr-Chr5 51033069 51033485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02470 13 129 AP2-EREBP Transcription Factor Family AT3G23230 58.537 2.96e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g02470 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02470 - - gmx:100779173 124.02