Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02469 ATGGATTTCCTCGAGTTCCAAAACCATGAGCTATCCTCTGCAAATTTCAATTTCCCTGTTTCTGAAGAATCATTCAGCTGGGAAGATTTCTTCACCTTCAGCTCCGATGACTACTCATCCTCCCAATCCAATTCTGCAGGAGGAATCGAATGTCAAGAAGTGTCATCACAAGTGCAAGTGACAAATAATGCTAACGACGCATACACAATATCGGCGACACCAGAATATCAGAGTAGCGGGAGTAATAAGAAAGAGAGGAGGCCGTACAGGGGAGTGAGGAGAAGGCCGTGGGGGAAATTCGCGGCGGAGATAAGAGACTCGACGAGAAATGGGGTGAGAGTGTGGATCGGGACGTTTGATACCGCGGAGGAGGCGGCGTTGGCGTACGACCAGGCGGCTTACTGCATGAAGGGGTCGATGGCGGTGCTGAATTTCACGGAGCAAGTGGTGAGGGAGTCGCTAGAAAGAATGGGGAGTAAGCCATGGGAGGAAGGTTCGTCTCCTGTGTTGGCCCTCAAGAGAAAGCATTCCTTGAGATCAAGGTCGTCATCATCTTCTTCCTCCAGCCATAAAAGGCCCAGACAGAATAAAAGCCCCTCCATCAGGGAGACACAAGCTCCCAACAACGTGCTCGTCTTGGAGGATTTGGGGGCTGAATATTTGGAGCATCTCTTGAGCTTGACCTCTTCTGACTTTGTTTCATTTTCATAG 711 0.4979 MDFLEFQNHELSSANFNFPVSEESFSWEDFFTFSSDDYSSSQSNSAGGIECQEVSSQVQVTNNANDAYTISATPEYQSSGSNKKERRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEEAALAYDQAAYCMKGSMAVLNFTEQVVRESLERMGSKPWEEGSSPVLALKRKHSLRSRSSSSSSSSHKRPRQNKSPSIRETQAPNNVLVLEDLGAEYLEHLLSLTSSDFVSFS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02469 236 MobiDBLite consensus disorder prediction 71 92 - -
Accr5g02469 236 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 PANTHER DNA-BINDING DOMAIN 50 226 IPR044808 GO:0003700|GO:0009873
Accr5g02469 236 FunFam Ethylene-responsive transcription factor 2 87 147 - -
Accr5g02469 236 CDD AP2 96 148 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Accr5g02469 236 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Accr5g02469 236 MobiDBLite consensus disorder prediction 173 208 - -
Accr5g02469 236 Gene3D AP2/ERF domain 88 148 IPR036955 GO:0003700|GO:0006355
Accr5g02469 236 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02469 Accr-Chr5 51026842 51027552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02469 79 225 AP2-EREBP Transcription Factor Family AT3G23240 55.782 1.81e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g02469 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02469 K14516 - gmx:100801682 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01994 2 54539201 54539809 Accr5g02469 5 51026842 51027552 CCT
Accr5g02469 5 51026842 51027552 Accr5g02469 5 51026842 51027552 ECH