Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02457 ATGGGTCTGAGAGATATAGGAGCATCACTTCCTCCAGGTTTTCGATTCTATCCGAGCGATGAGGAGCTGGTGTGTCATTACCTGTACAAGAAGATCACCAATGAGGAAATTCTCAAGGGCACTTTGGTCGAAATTGACTTGCATACTTGCGAACCATGGCAGCTTCCAGAGGTGGCGAAGCTGAATGCAAACGAATGGTATTTCTTCAGCTTCCGTGACCGTAAATACGCCACAGGATTCCGGACGAATAGAGCAACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATTACACGCGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCATGAATTTCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAGAGCAGAACAGACAACAACAGTGACAAACTCAGCCCACTGGATATTTTTGAGACCGCACCTTCATATACTTTTCCTTCCTCGTCTCCAACCAATCAAAATCAGCCTCCTGGCTTCTCCACTTTCACCTCCATGCCACATCATGATTACCAATACCAGAACCAAACCAGTTCTCTGATGAATCTCCTTCAATTCTCTCGGGAAACAAACACCCACAACACTACAAGTACTGTGACTACCCAAACTATTCCAATGAAAGGAGATCATGTTGGATATGACGATGGGTTCTTATGGGATATGGACCTGGAAGAAAACAGCATCCACCACCACCACAATGACGTGGCCTCAGCTCTGGATGGAATGAGATTCGAGGTTGATAATGATAGTATGGTCCTGTTATAA 867 0.4683 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPITREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRTDNNSDKLSPLDIFETAPSYTFPSSSPTNQNQPPGFSTFTSMPHHDYQYQNQTSSLMNLLQFSRETNTHNTTSTVTTQTIPMKGDHVGYDDGFLWDMDLEENSIHHHHNDVASALDGMRFEVDNDSMVLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02457 288 MobiDBLite consensus disorder prediction 177 202 - -
Accr5g02457 288 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Accr5g02457 288 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Accr5g02457 288 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Accr5g02457 288 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Accr5g02457 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02457 Accr-Chr5 50907001 50910556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02457 6 241 NAC Transcription Factor Family AT1G56010 48.374 1.65e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr5g02457 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02457 - - pcin:129298149 505.368