Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02453 ATGGCCAACGACGAAGGAACTTGGAGGCAGAGGAACGAATATAAGGAAGAAGATGAAAATGAAAGCTGCAGGGGAATTAGAGTGCGTGGTATGCAATTCGCCTACGATGGGCAACCACCGCTTTTTGTCGACTTCAACCTTGAGATCTCTACCGGATCGCGCTGCCTTCTGGTTGGCGCCAATGGATCCGGGAAGACCACTTTGCTGAAAATTCTGGCAGGCAAGCATATGGTCGGAGGAAGAGATGTTGTTCGGGTGTTAAATTGTTCCGCTTTCCACGATACTCAACTAGTTTGCAGTGGTGATCTGGCCTATTTGGGAGGATCCTGGAGTAAAACCGTTGGCTCAGCAGGGGAGATTCCACTCCAGGGAGACTTCTCTGCTGAACATATGATATTTGGAGTTGAGGGAACGGATCCTGAAAGGAGAGATAAGTTGATTGAGTTGCTTGATATAGATCTACAGTGGCGAATGCATAAGGTATCTGATGGGCAGAGGCGCAGAGTGCAAATTTGCATGGGTCTTCTTCATCCATACAAGGTTCTCTTGCTGGATGAGGTTACTGTAGACCTAGACGTTGTTACTAGGATGGATTTGCTGGACTTCTTCAGGGAAGAATGTGAGCAGAGAGGAGCTACAATTGTATACGCAACTCATATTTTTGATGGACTTGAGACATGGGCCACTCATCTAGCATACATACAAGACGGTGAGCTCAGGAGGGCTGAAAAGTTATCGGATGTTAGTGAGTTGAAGTGTTCGTCTAATCTACTCTCTGTTGTTGAGTCATGGCTCCGTGCTGAGACAAAGCTTGAAAAGAAGAGCCCTGTAAACCACGCTTCCAGCGTCCAAAAGACTTCTGTTGGTAGTTCTCCTTTTATTTCATCAAGACACATGGCATACTATCGGTAG 912 0.466 MANDEGTWRQRNEYKEEDENESCRGIRVRGMQFAYDGQPPLFVDFNLEISTGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVSELKCSSNLLSVVESWLRAETKLEKKSPVNHASSVQKTSVGSSPFISSRHMAYYR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02453 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 248 IPR027417 -
Accr5g02453 303 Pfam ABC transporter 44 188 IPR003439 GO:0005524
Accr5g02453 303 FunFam ABC transporter I family member 21 126 298 - -
Accr5g02453 303 SMART AAA_5 51 238 IPR003593 GO:0016887
Accr5g02453 303 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 26 265 - -
Accr5g02453 303 Gene3D - 24 278 IPR027417 -
Accr5g02453 303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 261 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02453 Accr-Chr5 50871681 50874305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02453 10 239 Calmodulin-binding Proteins AT2G36910 21.285 9.71e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02453 K12608 - qsa:O6P43_010488 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02453 5 50871681 50874305 Accr5g02453 5 50871681 50874305 ECH