Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02452 ATGGATTCCGCTAGGAGCTGGTTGCAAAAGTTACAACCACGAGATAAAATGAAGTCATCATCAAAGAAAAAGGAGGATAGTGCCGGAGTAGAACCAAATCAACCGGTAGATGAAGAAGCTCTTTCCAGTACCACAAAACAGAAGGTTGCTGCAGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCAGAAGAAGATCAAAACAACCTTCTTAAGTTTTTGGAGAAGAAGGAAACAGAATATATGCGCATTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATCGGAAAAGGTGCATTTGGTGAGGTTAGGATCTGCAGGGAAAAGACAACAGGCAGTGTTTATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGTATAGTCAAACTCTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATCATGGAGTATCTTCCTGGTGGAGATATGATGACCCTTCTTATGAGAAAGGACACCTTGACTGAAGATGAAGCCAGATTTTATGTTGCTGAAACAGTTCTGGCTATTGAATCTATTCATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATTTGTTACTTGATAAATATGGACACATGAAACTTTCAGATTTTGGACTATGTAAACCATTGGATTGCAGCACGCTTCAAGATGATTTTTCAGTAGGTCAGAATGCAAATGGATATACACAGAATGATGAACGCTCAGCTCCAAAACGCACTCAACAAGAAGTACTACAACACTGGCAAAAGAACAGGAGAACACTCGCTTATTCTACTGTTGGCACACCTGATTATATTGCTCCGGAAGTTCTATTGAAGAAAGGCTATGGAATGGAATGTGACTGGTGGTCGCTTGGAGCCATTATGTATGAAATGCTGGTGGGGTATCCTCCTTTTTATTCGGATGATCCAATGTCAACATGTAGAAAGATAGTAAGTTGGAAATCGCACTTGAAGTTTCCAGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTTGTAAACTTTTGTGCAATGTCAACCACAGACTAGGGTCAAATGGTGCTGATGAAATTAAGGCTCATCCATTCTTCAGAGGTGTGGAATGGGATAAACTCTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAATTAGATACTCAGAACTTTGAGAAGTTCGAAGAGGCAGACATCCAAAATCACCAAGCATCAAGATCTGGGCCTTGGAGAAAGATGCTCTCGTCTAAGGACTTAAATTTTGTTGGGTACACATACAAGAATTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAGGAAATCCACCAAATCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGATGATTCGGAAACATCAGAGGTGTCTGCTTCTACAGATGCGCCTGCAGGCAATCAATCTTCTCAAGGGAGCTTCCTAAACCTCTTGCCGCCCCGTTATGAGGGGTATCATAAAAATAAAGAAACCTCCTAA 1668 0.4083 MDSARSWLQKLQPRDKMKSSSKKKEDSAGVEPNQPVDEEALSSTTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRIQRHKMGVDDFELLTMIGKGAFGEVRICREKTTGSVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNLLLDKYGHMKLSDFGLCKPLDCSTLQDDFSVGQNANGYTQNDERSAPKRTQQEVLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVSWKSHLKFPEEARLSPEAKDLICKLLCNVNHRLGSNGADEIKAHPFFRGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEEADIQNHQASRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKSTKSKRPSIKSLFEDDSETSEVSASTDAPAGNQSSQGSFLNLLPPRYEGYHKNKETS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02452 555 Gene3D Phosphorylase Kinase; domain 1 116 444 - -
Accr5g02452 555 ProSiteProfiles Protein kinase domain profile. 118 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02452 555 CDD STKc_NDR_like 116 479 - -
Accr5g02452 555 SUPERFAMILY Protein kinase-like (PK-like) 91 468 IPR011009 -
Accr5g02452 555 Coils Coil 60 80 - -
Accr5g02452 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Accr5g02452 555 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Accr5g02452 555 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Accr5g02452 555 MobiDBLite consensus disorder prediction 496 515 - -
Accr5g02452 555 Pfam Protein kinase C terminal domain 434 478 IPR017892 GO:0004674|GO:0005524|GO:0006468
Accr5g02452 555 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr5g02452 555 Gene3D Transferase(Phosphotransferase) domain 1 202 433 - -
Accr5g02452 555 MobiDBLite consensus disorder prediction 496 555 - -
Accr5g02452 555 Pfam Protein kinase domain 119 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02452 555 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Accr5g02452 555 MobiDBLite consensus disorder prediction 9 31 - -
Accr5g02452 555 MobiDBLite consensus disorder prediction 516 539 - -
Accr5g02452 555 SMART pkinase_C_6 416 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr5g02452 555 MobiDBLite consensus disorder prediction 1 47 - -
Accr5g02452 555 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Accr5g02452 555 CDD MobB_NDR_LATS-like 52 113 - -
Accr5g02452 555 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 476 - -
Accr5g02452 555 SMART serkin_6 118 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02452 Accr-Chr5 50860462 50868070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02452 1 546 AGC Kinase Gene Family AT4G14350 77.778 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Accr5g02452 Pkinase 7.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02452 K08790 - qsa:O6P43_006882 961.444