Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02443 ATGGGTGACAGGATCAGAACAGATAGGAAACGCAATACCAAGAAAGGTGTGCGGAAGGTAATGAAGTGCCTATCATGCTCCGAGGAGCCATCAAGAGAAGAAGATGATATGGTTCCTTCATCTGAAGCTCTTGCAAACAAGGGTTGTTCAGCAAATGGGATTTCTTTTCAGACCAGTCAAATTGGCAAGATGCCAGATAATAGAAATATTGAGGAAATCGAATCATCCCTTTGTGGAAGTGGTTGTTTGAATTATGAGGAAGCTAGAGCTCGTTTAGGAAAATATGAATATCAGAAAGGAAATATAGAAGCTGCTTTACATTTTTTTGAGCGAATGGATACGGAGGTTGTAACTTCCATGATTAAAAGTTCTCTTTCCAAAAGGGGAAAGCACCACAAGAGACTTCGCCAGAAATATGCTACGCAATCATTGTCCATTCTTTCTGCTAGCGTACTGTTGGAAGCATTATTCCTAAAAGCAAAATCTCTGCAGGCTCTTGGAAAGTTTAAAGAAGCCGCCCTATCTTGCAAAGTCATTCCGGACATGGTTGAATCTTCATTACCCCAAGGCTTGCCTGAAAACTTTGGCGTTGGAGGTAAATTGCAGGAGACTCTGAGCAAGGTGATTGAGTTGCTTCCTGAATTGTGGAAACTTGCAGATAATCCACATGAAGCTATTATGTCCTACCGTCGGGCACTTCTTCATAAGTGGAATCTTAATGCAGAAACCAAAGCAAAGATTCAGAAAGATTTCTCTGTTTTTCTTCTATTTAGTGGAGAGGAAGCAAGTCCTCCCAGTCTTCGTTCCCAAATGGACACTTCATATGTACCCATGAATAACATAGAAGAGTCTATACTTCTTTTGATGATTCTGTTAAGACAGGTCTGTTGCAATCGAATTAAGTGGGATCCTTCAATTTTGGATCATCTTTCATTTGCTTTGTCTGTTTCTGGGGATTTGACGGCTTTAGCCAATCAATTGGAACAATTGCTCCCCTCCACTGTCAATCCAACAGAAAAATGCGAAACAATTGCTTTCTGTTATTATGGAGCAGGTCAGGACTCAGTGGCATTGGGACTTCTTAGAAAATTGTTATGTAGAAGAGAGGACCCAAAACATGTTTTAGCTTTGTTAATGGCTTCAAAGATTTGTTGTGAGAACCCTAATCTTGCTGGTGAAGGAATAAATTTTTCTTGCAGATTGCTTGAGAAATTGGAAGGAAGATGTGATCAGTTAGCAAGTTCTGCCAATTGCTTCCTTGGTCTTTCACTTTCAACACAGTCAAAATCGTCCATTTCTGATTCTGAGAGGGATAAAAGACAATCTGAGGCACTTCACAGCCTGGACATTGCCTCCAGAATGTCCAGAATGAGAAACCCCCTAATATTATACCATGTCAGTTTAGAATATGCTGAACAGAGAAAGTTGGATGCTGCCCTTTATTATGCCAAATGCTTGCTAGAACTGGAAGCAGGGTCTGATGTTAAAGGATGGTTATTATTAGCCAGGATATTATCAGCTCAAAGTCGATTCTTGGATGCTGAATCTGTTGTCGATGCTGCTCTGGATCAGACTGGGAAATGGGAACAAGGAAATTTGCTGCGAACAAAAGCTAAACTTCAGATTGCACAGGGCCATTTAAGGAGTGGCATGGAAACATATATTCAGCTTCTTGCTCTTCTTCAAATTCAGATCAGAAACTTTGGTTCTGAGAAGAAGCTAAATAACAACGATGATATCCAGGGACTGGAAATGGAAATATGGCATGATCTTGCTTTCTTATACATAAGCCAGTCAAAATGGCATGATGCAGAAGCGTGTCTTTCAAAGTCTAAGGCCATCAAGCTATACTCTGCTTCTAGATGTCACGCAACTGGTCTAATATATGAAGCAAAGGGCCTTTATAAAGAGGCTCAAAAAGCTTATCGTGAAGCTTTGGATATTGATCCCAACCATGTCCCAAGCTTGGTTTCTAGTGCTCTGGTTCTCAGAAGGTGCGGTAGTGGAAAATTGAATGCTGCAGGTCTAGGCTATCTTATGGATGCTCTAAGGCATGACAGAATGAATGCTTCTGCTTGGTACCATCTTGGCCTTCTTCACAAGGCTGAGGGTTCTGTATCGTCATTAATTGAAGCCATGGAATGTTTCCAGGCTGCGCACTGTCTTGAAGAAACTGCACCAGTTGAGCCTTTCCGATGA 2199 0.412 MGDRIRTDRKRNTKKGVRKVMKCLSCSEEPSREEDDMVPSSEALANKGCSANGISFQTSQIGKMPDNRNIEEIESSLCGSGCLNYEEARARLGKYEYQKGNIEAALHFFERMDTEVVTSMIKSSLSKRGKHHKRLRQKYATQSLSILSASVLLEALFLKAKSLQALGKFKEAALSCKVIPDMVESSLPQGLPENFGVGGKLQETLSKVIELLPELWKLADNPHEAIMSYRRALLHKWNLNAETKAKIQKDFSVFLLFSGEEASPPSLRSQMDTSYVPMNNIEESILLLMILLRQVCCNRIKWDPSILDHLSFALSVSGDLTALANQLEQLLPSTVNPTEKCETIAFCYYGAGQDSVALGLLRKLLCRREDPKHVLALLMASKICCENPNLAGEGINFSCRLLEKLEGRCDQLASSANCFLGLSLSTQSKSSISDSERDKRQSEALHSLDIASRMSRMRNPLILYHVSLEYAEQRKLDAALYYAKCLLELEAGSDVKGWLLLARILSAQSRFLDAESVVDAALDQTGKWEQGNLLRTKAKLQIAQGHLRSGMETYIQLLALLQIQIRNFGSEKKLNNNDDIQGLEMEIWHDLAFLYISQSKWHDAEACLSKSKAIKLYSASRCHATGLIYEAKGLYKEAQKAYREALDIDPNHVPSLVSSALVLRRCGSGKLNAAGLGYLMDALRHDRMNASAWYHLGLLHKAEGSVSSLIEAMECFQAAHCLEETAPVEPFR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02443 732 Gene3D Tetratricopeptide repeat domain 617 724 IPR011990 GO:0005515
Accr5g02443 732 Pfam Tetratricopeptide repeat 622 652 IPR013105 -
Accr5g02443 732 SUPERFAMILY TPR-like 585 705 IPR011990 GO:0005515
Accr5g02443 732 SMART tpr_5 690 726 IPR019734 GO:0005515
Accr5g02443 732 SMART tpr_5 460 493 IPR019734 GO:0005515
Accr5g02443 732 SMART tpr_5 585 618 IPR019734 GO:0005515
Accr5g02443 732 SMART tpr_5 495 528 IPR019734 GO:0005515
Accr5g02443 732 SMART tpr_5 619 652 IPR019734 GO:0005515
Accr5g02443 732 PANTHER PROTEIN NPG1 21 732 IPR043376 -
Accr5g02443 732 Gene3D Tetratricopeptide repeat domain 279 616 IPR011990 GO:0005515
Accr5g02443 732 SUPERFAMILY TPR-like 440 559 IPR011990 GO:0005515
Accr5g02443 732 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02443 Accr-Chr5 50816738 50820457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02443 11 732 Calmodulin-binding Proteins AT4G28600 52.381 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02443 K21843 - gmx:100800762 897.501