Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02435 ATGGCAGCACGCACTACTTCTTCCTTTGAAAGGTCAAGCACTAAGCAGCTCAATAACATGGGTATGTCTGGACCATTGCCGTCATCCTTGTCAGTCCTTCCAACACCGATGGGAGAGACATTTGCCAAGTTTTCTGATTCTCAGCCGGCTGTCATGGCAAAAGAACTTATGTCGTCTGGGCCTATAACTCAGCCGAGTCATTTAAATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCTTCCCCGGGATATTCAACTGATCTTCATTACTCATCTCTTTTGCCTCATGAAGAACACTCAACAAGTGATCATTTCATTTCACACTCATCCAGTGACATGGGTTCTCTGCCATTTTCTTATTCTTCCAATAGTGGACCCCTTCCTTCTCCCACACCAAATAATTATGTCAAAGAAAACGGTGCTTCCTGGAATATAGAACACCTACCCAACTTTCTTGATTACCCTGTTAATACTACCGTCGAGAATGGTCAAGCAGAAAACATTGCCTGCAATGTCATGGTATCCGAAGAGTACGGTAAGCAAAATGAGTGGCAAGAGTGGGCTGACCAGCTTATAAGTGAAGATAACCCTTTGGCTTCTAATTGGAATGACCTTCTTACTGACAACGTTCAAGATCTTGAACCAAAGGTGGGGTGCCAGGTTCCACATATTCCAGGAAACCAGTCCCAAGGTCAGCAGCTACTTCCTGCTTCATCTGGAGACAATTGCTTTGGTGCTCCCCCAGCCTCCTCAGCAAGTTCTGCTCCTTCCAAGCCACGCATGCGCTGGACACCAGAGCTGCATGAGGCCTTTGTGGATGCTGTCAACAAACTTGGTGGCAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGTCACTTGCAGAAATACAGGACTGCTAGGTATAGACCGGAACCATCTGAAGGACCCTCAGAGAAACGAGTAACTTCCATTGAAGATATGCCTCCTCTAGACTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGGCTGCAGATGGAGGTTCAGAAGCGGTTGCATGAGCAACTTGAGATTCAACGAAACCTACAACTGCGAATAGAAGAACAAGGAAGGTACCTTCAAATGATGTTTGAGAAGCAATGCAAATCTGGCGCAGACAAGAAGGCATCATCAGCATCTGCCACAGAGAATCCATCTGCATTATCTTCAGATGCTATCAAAGATTGTCCTGCCAAAGGTGAGGCGGAAACCTCCCAAGTGGAGGGCAATTGCAAGTCAGGACGAGATCAAGCTAATAGCAATATTGCAGTTGGGGAAAGCTCTCTGAAAGTGGGTATGAAGAATGATGGTCCTGAAAATCAAGCTTCTGATAATGCTAAGCAACAAACCGGTGAAGAGAGTACTCCAGCCTCAAAGAGGCAGAGGACAGACGAGTAA 1458 0.4575 MAARTTSSFERSSTKQLNNMGMSGPLPSSLSVLPTPMGETFAKFSDSQPAVMAKELMSSGPITQPSHLNSSGAVGHMFSSSPGYSTDLHYSSLLPHEEHSTSDHFISHSSSDMGSLPFSYSSNSGPLPSPTPNNYVKENGASWNIEHLPNFLDYPVNTTVENGQAENIACNVMVSEEYGKQNEWQEWADQLISEDNPLASNWNDLLTDNVQDLEPKVGCQVPHIPGNQSQGQQLLPASSGDNCFGAPPASSASSAPSKPRMRWTPELHEAFVDAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGPSEKRVTSIEDMPPLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGADKKASSASATENPSALSSDAIKDCPAKGEAETSQVEGNCKSGRDQANSNIAVGESSLKVGMKNDGPENQASDNAKQQTGEESTPASKRQRTDE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02435 485 Pfam Myb-like DNA-binding domain 260 311 IPR001005 -
Accr5g02435 485 MobiDBLite consensus disorder prediction 458 476 - -
Accr5g02435 485 MobiDBLite consensus disorder prediction 222 261 - -
Accr5g02435 485 MobiDBLite consensus disorder prediction 394 409 - -
Accr5g02435 485 SUPERFAMILY Homeodomain-like 256 312 IPR009057 -
Accr5g02435 485 Pfam MYB-CC type transfactor, LHEQLE motif 343 390 IPR025756 -
Accr5g02435 485 Coils Coil 346 366 - -
Accr5g02435 485 MobiDBLite consensus disorder prediction 223 258 - -
Accr5g02435 485 MobiDBLite consensus disorder prediction 426 446 - -
Accr5g02435 485 NCBIfam myb-like DNA-binding domain, SHAQKYF class 258 312 IPR006447 GO:0003677
Accr5g02435 485 MobiDBLite consensus disorder prediction 1 31 - -
Accr5g02435 485 MobiDBLite consensus disorder prediction 394 485 - -
Accr5g02435 485 Gene3D - 257 316 - -
Accr5g02435 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 255 315 IPR017930 -
Accr5g02435 485 FunFam Myb family transcription factor 257 315 - -
Accr5g02435 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 242 474 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02435 Accr-Chr5 50759857 50762951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02435 34 428 G2-like Transcription Factor Family AT4G28610 46.569 7.09e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g02435 Myb_DNA-binding 8.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02435 - - gmx:100810560 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02049 2 55461495 55465881 Accr5g02435 5 50759857 50762951 CCT
Accr5g03001 5 55453415 55455716 Accr5g02435 5 50759857 50762951 CCT
Accr5g02435 5 50759857 50762951 Accr5g02435 5 50759857 50762951 ECH
Accr2g02049 2 55461495 55465881 Accr5g02435 5 50759857 50762951 ECH