Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02421 ATGAATAATAACATCAAGTATAGGGGTGGTGAGATGGAGAGAAGCGTGTCAGACTTTGGATCGTCAGGGAGTGAAGAGGAGATGATGGGGATAAGGAAAGGGCCGTGGACGGAGGAAGAGGATGCTATTCTGGCCAACCACATCTCCTTTCACGGCGAAGGTCACTGGAACTCTCTCGCTCGCTCCGCTGGTCTGAAGCGAACGGGGAAAAGCTGCAGATTAAGATGGCTAAACTACCTGCGTCCTGGTGTCCGGCGTGGCAATATAACCCTCCAAGAACAGCTCTTGATTCTTAATCTCCATTCCCGATGGGGCAACAGGTGGTCTAAGAGTTTCCAGGGAGGACAGACAATGAGATAA 360 0.5083 MNNNIKYRGGEMERSVSDFGSSGSEEEMMGIRKGPWTEEEDAILANHISFHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPGVRRGNITLQEQLLILNLHSRWGNRWSKSFQGGQTMR 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02421 119 MobiDBLite consensus disorder prediction 1 31 - -
Accr5g02421 119 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Accr5g02421 119 FunFam Myb transcription factor 33 85 - -
Accr5g02421 119 Gene3D - 33 85 - -
Accr5g02421 119 SUPERFAMILY Homeodomain-like 34 110 IPR009057 -
Accr5g02421 119 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 84 IPR017930 -
Accr5g02421 119 SMART sant 32 82 IPR001005 -
Accr5g02421 119 CDD SANT 35 80 IPR001005 -
Accr5g02421 119 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 30 110 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr5g02421 119 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02421 Accr-Chr5 50584457 50585036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02421 20 113 MYB Transcription Factor Family AT2G47190 71.277 2.48e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr5g02421 Myb_DNA-binding 6.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02421 K09422 - gmx:100819467 163.696