Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02411 ATGGCTCTCTGGATGGAAAAGGATTCTGAGCCCTTGACCGAAAGCGAGAAAGCAGACCTTGATGCTATTGCTGCACTCAAAGAGTCCGCTGCTATTGAACTTAAGGAAAAGGGCAATCAATATGTCAAAATGGGCAAAAAACATTATTCTGATGCTATTGATTGTTACACAAGGGCAATAAATCAGAAAGTCCTAAGCGACTCAGAGAACTCAGTTCTTTTTGCAAATAGAGCACATGTGAATTTGATGCTGGGAAATTATAGACGTGCTCTAACAGATGCTGAGGAGGCAATTAAGTTGTGCCCCTCAAATATAAAGGCATTTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCCAAAGCTCAATCCCATTGTCGAAACGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCCAACAGATTGATCTAAAGAAAGCAGAACAGGACAAGCATGAAGCTGAAGTCTCCAAAGCTGTTGCAGAGGCAAAGGAACTTGTGTTGGCAATAGAAAATAGAGGCTTGAAGATTGGGAAGGCAATGTTTCGAGAACTTACTGGACTTAAAAAACCAGTATTAGACAAAAATAATATTCTTCATTGGCCCGTTCTTCTCCTGTATGCGGAGGTTATGTCCAGTGACTTCATTGAAGATTTCTGCGAGACTGACATGTTTTCAGTTCATCTTGATATGATGTTTGCGGATGATCAGCCTTTGCCATGGGATGATAAAAGCAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTCTCAAGGGCAAAACTTCTTCATTCTTTATTGGAGGGAACTGCAGCTTCTCAACAAGAAAGTGCCGGTGATGAAGAGAAAGATGCAGTTCACGGCTCTAACCATGTCAACACAGGCGCTCCTAAATGGGTCAAAGTAAATGAAAGGTCGACGCTCCATGATGTTCTGAAGGACCCCAATTTTATCATTCCCGGCATCCCAGTATTCTATGTTGTTTCAAAGCGATCTAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGACTCCTCCAAGCATATGA 1086 0.4125 MALWMEKDSEPLTESEKADLDAIAALKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAINQKVLSDSENSVLFANRAHVNLMLGNYRRALTDAEEAIKLCPSNIKAFYRAAKASLSLNLLAKAQSHCRNGLQLDPNNEELKKLGQQIDLKKAEQDKHEAEVSKAVAEAKELVLAIENRGLKIGKAMFRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMMFADDQPLPWDDKSNYKREFIELYYEAGSGVCLSRAKLLHSLLEGTAASQQESAGDEEKDAVHGSNHVNTGAPKWVKVNERSTLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWTPPSI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02411 361 SUPERFAMILY TPR-like 22 156 IPR011990 GO:0005515
Accr5g02411 361 Gene3D Tetratricopeptide repeat domain 24 177 IPR011990 GO:0005515
Accr5g02411 361 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Accr5g02411 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 11 358 - -
Accr5g02411 361 MobiDBLite consensus disorder prediction 286 305 - -
Accr5g02411 361 Coils Coil 141 170 - -
Accr5g02411 361 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Accr5g02411 361 CDD CTWD_Cns1-like 170 353 - -
Accr5g02411 361 SMART tpr_5 105 138 IPR019734 GO:0005515
Accr5g02411 361 SMART tpr_5 71 104 IPR019734 GO:0005515
Accr5g02411 361 SMART tpr_5 31 66 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02411 14 160 Calmodulin-binding Proteins AT3G25230 31.646 1.43e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02411 K24927 - gmx:100783179 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02411 5 50239733 50242533 Accr5g02411 5 50239733 50242533 ECH