Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02385 ATGGAAGAAGGTGAGAGCTGTTCGGCAAGAAGGGAGTTAACGGCACTGGTGGTGGACGATCAAGAAGTGTTGAGGAGGATCCATGGGAGGCTGTTGAAGGATGTTGGAGTGAGCCACGTGGAGGCTGCTAGAAATGGGAAAGAAGCCATCGATATTCACAGAGGAGGCCAAAGTTTTGACCTAATTCTCATGGACCTCGACATGCCCGTCATGAATGGCATCCAGGCGACGAGGGGACTGAGAGCAATGGGAGTGAGAAGCAAGATCGCAGGCGTGTCAGCAAGAAACGAAGGAGAAGGAGTTAAAGAGTTCCAAGAAGCGGGTCTTGATCTCCTGTTTCCCAAACCCTTGACCACTCTTCACCTCTCTTCTCTTGTCACCCAAATCAAACCTCTTTGA 399 0.5063 MEEGESCSARRELTALVVDDQEVLRRIHGRLLKDVGVSHVEAARNGKEAIDIHRGGQSFDLILMDLDMPVMNGIQATRGLRAMGVRSKIAGVSARNEGEGVKEFQEAGLDLLFPKPLTTLHLSSLVTQIKPL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02385 132 Pfam Response regulator receiver domain 16 122 IPR001789 GO:0000160
Accr5g02385 132 Gene3D - 2 131 - -
Accr5g02385 132 SMART REC_2 13 126 IPR001789 GO:0000160
Accr5g02385 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 126 - -
Accr5g02385 132 SUPERFAMILY CheY-like 12 129 IPR011006 -
Accr5g02385 132 ProSiteProfiles Response regulatory domain profile. 14 130 IPR001789 GO:0000160
Accr5g02385 132 CDD REC_hyHK_CKI1_RcsC-like 16 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02385 Accr-Chr5 50032955 50033439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02385 2 129 Response Regulator Gene Family AT3G04280 40.909 2.85e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr5g02385 Response_reg 7.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02385 - - mesc:110629414 134.806