Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02377 ATGGGAGACAGTGCAATTTGCGTCGAATTACCAGCAGATAGAACAGATGAAAACGGTGAGATATCAAGAATGGACCTGAAGAGGGACTTCCAATGTCTTACTGATACTGAACTTGACTCCTCCCCGACCAAGAAACAAGCAAAAGAAGTCTCAAACGATGACGTGCGCTCTGAGGTTTCCAATCCCAACATTTGTTCGAAAGAGAATATGTTAGCATTTCAAGATATTAGTAGCCAGCCAAGCGAGTTGGCAAATACTGATCAGGCAGAGTGTGGAGAAGTAACGTCTACTTGTTTGGAGAATTCTAGTTCGGATGAGACCTTGAGTGACGGCGGTGGTGATCAGAATACTATTTCTCAGAACGAGAAGGGCGTGAGCAGTGCTGAAACGACGTCCTGTGTTGTACTGGAAATTCCCGAGCATGCTAGTTCATCTGGAATCAGAAAGATTACTTTTAAATTCAGTAAAAAGAAGGAGGACTATGACTATCAGTCCCTTAACACTAATAGGAATCCTTATGAAGAAGAGCCAAGTTCTGATTATAAGTTGGGGATGTTAGAAAGCCCGTGTGGGATGGAATATGCTCGAGCTGGTGATTGTAACTTGTACGCTCGAAATATGGAGTTGAAAATGTCAAAGAAGGTAGTTCCTAGGTGTTATCCTACAAATGTTAAAAAGCTGCTCGCAACTGGTATTCTTGATGGAGCTCGAGTGAAGTACATTTATACTCATAGCGCAGGAAAGATTGAGCTGCCTGGGATTATCCAGGATGGTGGATATATGTGTGGCTGCTCGTTGTGCAGCTTCTCCAGAGTCCTAAGTGCGTTTGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGGCATCCAAATAATCACATATATCTGGAAAATGGAAAACCAATTTATAGCATTATACAGGAAATGAAAACCGCTCCACTCAGCTTATTAGATGAGGTTATAAAGAACGTTGCTGGTTCATCTGTCAATGAAGAGTCGTTCCATGTTTGGAAAGCAAGTCTTTTGGAAAGCAACGGGCAGGTTGAGGCAGAAAAGAATTTTAACTCCAGGCTTGTTGGCATGCCTCATAAAACAATAAGTGAATTTGTAGATGGTATGAGCTACATGTCCTGTTCAGATGTGCTGAGTCCTGTTGAGCAGCAAAGTCATGTGAAGCTGACCACTGACGAGAGGAAACATGTGGTGAAAAAAGCAAGCTCCCATGCTTCTAACACAGGTCTACAGCAAAAGAAAACTGCAGATGGTTGCAACAAGAGAAGGGATAATGATTTGCATAGGCTACTTTTTATGCCAAATGGACTACCAGATGGCGCTGAATTGGCTTACTATGTCAAAGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGCATAGTTTGTGGTTGTTGTGATAGAGAGATAAGCCCGTCACAGTTTGAAGCTCATGCTGGAATGGCTGCCCGGCGTCAACCTTATCGCCATATATATACTTCCAATGGATTAACACTTCATGATATAGCCCTCTCACTAGCAAATGGTCAAAACCTTACCACGGGAGATAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGCGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGTTTGTTTAGGTTTACCGTGTGCCCCTGAAAGCTGTTGGCTGTGTCAAACTTGTAGAGATATTTCTGGCTGCAGCAGATTATCTTCTACAGCAAGGCCAATAAAGATAAGGTTGACCCGGGTTGTTAAAGCGCCTGAATTTGAAATGGGTGGTTGTGTTGTTTGCAGGCAGCACGATTTTAGCGTCGCTAAATTTGATGAACGAACAGTTATAATTTGTGACCAGTGCGAGAAGGAGTATCATGTTGGGTGCTTACGGGACATTGGGCTATGTGAGTTGGAAGAATTGCCCAAGGACAAGTGGTTTTGTTGTGACGACTGCAATCGAATATATGTGGCCCTACAAAATTCAGTTTCTGCTGGAGCTGAGATGATACCAGCTTCCCTGTCAGTCCTAATAAATAGGAAGCGTGAGGAGAGGGGCTTACCCATTGATGGAGGAGTGATTGATGATATCCAATGGCGAATTCTAAGTGGAAAAAGTCGTTATCCAGAACATTTACCATTACTTTCACGTGCTGCTGCAATCTTTCGAGAGTGTTTTGATCCCATTGTTGCAGTCTCTGGTCGTGACCTGATTCCTGTTATGGTGTATGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGTGTTGTTTTGATAGTGAAATCTGTTGTTGTATCTGCTGGACTACTAAGGATTTTTGGACGTCATGTTGCCGAGCTTCCAATGGTTGCTACAAGTAGAGAACATCAAGGAAAAGGTTATTTTCAAGTGTTATTCTCTTGCATAGAGAAGTTGCTGTTGTCCCTGAAGGTGGAAAAACTTGTCCTTCCTGCAGCCGAGGATGCTGAATCAATTTGGACCAGAAAATTAGGCTTCCGAAAGCTGACTGAAGAACAGTTATCCAAATATGTCAGAGAGGTGCAGCTCACCCTCTTTAACAAGACTTCGATGCTGGAGAAGACAGTGCAGCAGGCAGTGGAATGA 2613 0.4328 MGDSAICVELPADRTDENGEISRMDLKRDFQCLTDTELDSSPTKKQAKEVSNDDVRSEVSNPNICSKENMLAFQDISSQPSELANTDQAECGEVTSTCLENSSSDETLSDGGGDQNTISQNEKGVSSAETTSCVVLEIPEHASSSGIRKITFKFSKKKEDYDYQSLNTNRNPYEEEPSSDYKLGMLESPCGMEYARAGDCNLYARNMELKMSKKVVPRCYPTNVKKLLATGILDGARVKYIYTHSAGKIELPGIIQDGGYMCGCSLCSFSRVLSAFEFEQHAGAKTRHPNNHIYLENGKPIYSIIQEMKTAPLSLLDEVIKNVAGSSVNEESFHVWKASLLESNGQVEAEKNFNSRLVGMPHKTISEFVDGMSYMSCSDVLSPVEQQSHVKLTTDERKHVVKKASSHASNTGLQQKKTADGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAVCLGLPCAPESCWLCQTCRDISGCSRLSSTARPIKIRLTRVVKAPEFEMGGCVVCRQHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGAEMIPASLSVLINRKREERGLPIDGGVIDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGRHVAELPMVATSREHQGKGYFQVLFSCIEKLLLSLKVEKLVLPAAEDAESIWTRKLGFRKLTEEQLSKYVREVQLTLFNKTSMLEKTVQQAVE 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02377 870 ProSitePatterns Zinc finger PHD-type signature. 598 653 IPR019786 -
Accr5g02377 870 Pfam Tify domain binding domain 253 308 IPR032308 -
Accr5g02377 870 Pfam Tify domain binding domain 458 507 IPR032308 -
Accr5g02377 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 512 592 IPR013083 -
Accr5g02377 870 MobiDBLite consensus disorder prediction 41 55 - -
Accr5g02377 870 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 749 842 IPR016181 -
Accr5g02377 870 ProSitePatterns Zinc finger PHD-type signature. 525 564 IPR019786 -
Accr5g02377 870 MobiDBLite consensus disorder prediction 100 125 - -
Accr5g02377 870 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 512 590 - -
Accr5g02377 870 SUPERFAMILY FYVE/PHD zinc finger 510 565 IPR011011 -
Accr5g02377 870 ProSiteProfiles Zinc finger PHD-type profile. 522 567 IPR019787 -
Accr5g02377 870 Gene3D - 746 853 - -
Accr5g02377 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 594 656 IPR013083 -
Accr5g02377 870 PANTHER AUTOIMMUNE REGULATOR 19 864 - -
Accr5g02377 870 MobiDBLite consensus disorder prediction 36 63 - -
Accr5g02377 870 SUPERFAMILY FYVE/PHD zinc finger 596 651 IPR011011 -
Accr5g02377 870 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 707 857 IPR000182 GO:0016747
Accr5g02377 870 SMART PHD_3 597 654 IPR001965 -
Accr5g02377 870 SMART PHD_3 524 565 IPR001965 -
Accr5g02377 870 FunFam PHD zinc finger protein 596 656 - -
Accr5g02377 870 FunFam PHD zinc finger protein 746 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02377 Accr-Chr5 49892030 49899534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02377 1 865 PHD Transcription Factor Family AT3G53680 53.378 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02377 - - gmx:100808999 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02377 5 49892030 49899534 Accr5g02377 5 49892030 49899534 ECH