Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02360 ATGATCGTCGGCCTAATAAGTCTGTGGCAGGCCCGTTTTATTTCAGCCCAGAAAACACGCGGCCCCTCGTTTATTAGGGATCGTCCTTCGCCAATTGCGCCTCTGGTAGTTTTAGGGTTTCAACTTTCAAGTGTTGGGAGTAGCATAACTGCGGAGAAAATGGCGAGGATAAAGGTGCACGAGCTGAGGAATAAATCAAAGCCAGAGCTACTTAACCAGTTGAAGGAACTCAAGGCAGAGCTCGCTTTACTCCGAGTCGCCAAGGTCACCGGCGGTGCCCCTAACAAGCTCTCTAAGATTAAGGTTGTGAGGCTGTCAATAGCGCAGGTGTTGACTGTTATTTCCCAGAAGCAGAAAGCGGCTTTGAGGGAGGTTTACAAAAACAAGAAGTATCTGCCTCTTGATCTCCGTCCCAAGAAGACCCGAGCCATTCGCAGGCGTCTCACCAAACACCAGGCTTCATTGAAGACAGAGCGCGAAAAGAAGAAGGAGATGTACTTTCCCTTGAGGAAGTATGCCATCAAAGTGTAG 531 0.4915 MIVGLISLWQARFISAQKTRGPSFIRDRPSPIAPLVVLGFQLSSVGSSITAEKMARIKVHELRNKSKPELLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPLRKYAIKV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02360 176 Coils Coil 67 87 - -
Accr5g02360 176 PANTHER 60S RIBOSOMAL PROTEIN L35 54 176 IPR045059 GO:0000463|GO:0022625
Accr5g02360 176 FunFam 60S ribosomal protein L35 131 176 - -
Accr5g02360 176 SUPERFAMILY Ribosomal protein L29 (L29p) 57 118 IPR036049 GO:0003735|GO:0005840|GO:0006412
Accr5g02360 176 CDD Ribosomal_L29_HIP 61 117 - -
Accr5g02360 176 Pfam Ribosomal L29 protein 61 117 IPR001854 GO:0003735|GO:0005840|GO:0006412
Accr5g02360 176 FunFam 60S ribosomal protein L35 54 130 - -
Accr5g02360 176 Gene3D - 54 130 IPR036049 GO:0003735|GO:0005840|GO:0006412
Accr5g02360 176 Hamap 50S ribosomal protein L29 [rpmC]. 57 117 IPR001854 GO:0003735|GO:0005840|GO:0006412
Accr5g02360 176 Gene3D - 131 176 - -
Accr5g02360 176 NCBIfam 50S ribosomal protein L29 61 117 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02360 Accr-Chr5 49778653 49780426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02360 54 176 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 91.870 2.31e-74 217