Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02332 ATGACAAGGGACGTCCTCATGAGCATTGATGGTGATGATAAAGAATTTCAAGAATTGGCTCAGCGTCTACGAGATGGTAAAAAAACCACCAAAGAGGGAGTTGTTGGTGATGTACATAGTTTCCGTGAGGATGATGAGTTAAAGAGTAATGGAACAGCTGAAGAAGTTAAAGTGGGACAAGATGGGATTTTGGATGCCCCAGCTGTTCGGCATATGCCACAACAACAGCCTCAAGGGGCTATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCGCAGCACTGCTTTGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATCTTGGAAGATCTAACCAATCAAATAGATCTTGTCTTGACTGAGGTAGCAATGCCTTGCTTATCAGGCATTGGCCTTCTGTCCAAAATTATGGCCCACAAAACGCGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTCAAAAACCTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGCAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCGAAGAGTCTTGAGAGGTCTGATAACAGCGGCAGCAACGATGAAGAAGACAATGGTAGTGTAGGTCTAAATAATGGGGATGGTAGTGACAATGGTAGTGGTACTCAGAGCTCGTGGACTAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCACAGTGGGATCATATAGCTGAGTGCCCTGATAGCACCTGCGCTCAAGTTGTTCTCTCAAATGCCGAAATTGGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGAGCTGAAAGTGGACTCGAGTAGGGATCTTGGCTTGATTCTCGACTATAGAAATGAGGTTTTAACCAATAATTTGGGGGAAAAACATAGTAACCCACTTGATATAGGCTCCTCTAAATTCAATGAGCAACTTAATAGAGGACAGCTGAAACTTCACTGTGAAGAGCCTTCTAACAAGTCAAGATGCAAAGGTCCTTTTCAGTCTGATGCTGTTATTAGCACATATGATTTGCGTATTCATGGTGGAGAATTTGAAGCCTCCAATAGAAGAGCCAAGCCCTCAGATACTGAAAGCAAAGCTATAAATGATAATGAAGAACTGCCATCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGATTACAATTCAGGATGAGCGTAATGTTTTAAGACGTTCAGACCTTTCAGCCTTTTCAAGGTATAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCTGGAAGCCATTCTCCCCAGAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATCCAATCGCATTCTAGTGGGAATCCCCCTAACCAGAACTCAAATGGTGCCAGCAATAACATAGACATGGGCTCCACCACTGATAACGCTTTCACTAAATCTGCTGTTATGAGCAAGATAACTGTGGCGTCACCTGTACATAATACTGAAGATATGACAGCCTCAACTATGCTAGAACCTCCTAGAGGAGGGACACACAAAGACTCTCCAACACAGGACTTCCACAGCATATACAACAACCATAGCTGCATTGTTAACAACATGCAGCATCAGGTAACTCTGGACCATGATGATGCATCATCAAAGAAAATTGCTGCCAGTGCTCCACACCATGGGTCATCAAATGTAGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGCGTGTCAAGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTCAATGCTGGAGGGATAAACATAGAAAATAACAATGGAATTGCTGGGAATAGTCGAGGTGGTGATGCTAGTGGGAGCGGGAGCGCTAACAGAATAGATCAGAAGAAGACTTCTCAAAGAGAAGCTGCCTTAACAAAATTTCGCCAGAAGAGGAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAGAAATTAGCTGAACAACGACCTCGCTTTCGTGGACAATTTGTTCGGCAGGCTACAAGTGAGACAGAGGAAGCAACTGACAACTGA 2238 0.429 MTRDVLMSIDGDDKEFQELAQRLRDGKKTTKEGVVGDVHSFREDDELKSNGTAEEVKVGQDGILDAPAVRHMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLCNCSYEVIEAANGLQAWKILEDLTNQIDLVLTEVAMPCLSGIGLLSKIMAHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLERSDNSGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQVVLSNAEIGGNKMFSVAIKECPDQKDQLELKVDSSRDLGLILDYRNEVLTNNLGEKHSNPLDIGSSKFNEQLNRGQLKLHCEEPSNKSRCKGPFQSDAVISTYDLRIHGGEFEASNRRAKPSDTESKAINDNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSHSPQNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKITVASPVHNTEDMTASTMLEPPRGGTHKDSPTQDFHSIYNNHSCIVNNMQHQVTLDHDDASSKKIAASAPHHGSSNVVEGNVGNYSINRSVSSSNNGSNGQNGSSTAVNAGGINIENNNGIAGNSRGGDASGSGSANRIDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQATSETEEATDN 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02332 745 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Accr5g02332 745 MobiDBLite consensus disorder prediction 508 534 - -
Accr5g02332 745 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
Accr5g02332 745 Pfam CCT motif 692 734 IPR010402 GO:0005515
Accr5g02332 745 MobiDBLite consensus disorder prediction 215 232 - -
Accr5g02332 745 MobiDBLite consensus disorder prediction 476 534 - -
Accr5g02332 745 FunFam Two-component response regulator-like PRR37 91 249 - -
Accr5g02332 745 CDD psREC_PRR 93 196 - -
Accr5g02332 745 Gene3D - 90 250 - -
Accr5g02332 745 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 316 IPR045279 GO:0009736
Accr5g02332 745 MobiDBLite consensus disorder prediction 609 745 - -
Accr5g02332 745 MobiDBLite consensus disorder prediction 215 287 - -
Accr5g02332 745 MobiDBLite consensus disorder prediction 619 685 - -
Accr5g02332 745 SMART REC_2 91 206 IPR001789 GO:0000160
Accr5g02332 745 ProSiteProfiles CCT domain profile. 692 734 IPR010402 GO:0005515
Accr5g02332 745 MobiDBLite consensus disorder prediction 686 701 - -
Accr5g02332 745 MobiDBLite consensus disorder prediction 702 717 - -
Accr5g02332 745 SUPERFAMILY CheY-like 89 215 IPR011006 -
Accr5g02332 745 MobiDBLite consensus disorder prediction 246 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02332 Accr-Chr5 49574010 49581453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02332 167 741 Response Regulator Gene Family AT5G02810 48.922 6.27e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr5g02332 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02332 K12129 - gmx:100796933 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02332 5 49574010 49581453 Accr5g02332 5 49574010 49581453 ECH