Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02331 ATGACAAGGGACGTCCTCATGAGCATTGATGGTGATGATAAAGAATTTCAAGAATTGGCTCAGCGTCTACGAGATGGTAAAAAAACCACCAAAGAGGGAGTTGTTGGTGATGTACATAGTTTCCGTGAGGATGATGAGTTAAAGAGTAATGGAACAGCTGAAGAAGTTAAAGTGGGACAAGATGGGATTTTGGATGCCCCAGCTGTTCGGCATATGCCACAACAACAGCCTCAAGGGGCTATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCGCAGCACTGCTTTGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATCTTGGAAGATCTAACCAATCAAATAGATCTTGTCTTGACTGAGGTAGCAATGCCTTGCTTATCAGGCATTGGCCTTCTGTCCAAAATTATGGCCCACAAAACGCGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTCAAAAACCTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGCAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCGAAGAGTCTTGAGAGGTCTGATAACAGCGGCAGCAACGATGAAGAAGACAATGGTAGTGTAGGTCTAAATAATGGGGATGGTAGTGACAATGGTAGTGGTACTCAGAGCTCGTGGACTAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCACAGTGGGATCATATAGCTGAGTGCCCTGATAGCACCTGCGCTCAAGTTGTTCTCTCAAATGCCGAAATTGGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGAGCTGAAAGTGGACTCGAGTAGGGATCTTGGCTTGATTCTCGACTATAGAAATGAGGTTTTAACCAATAATTTGGGGGAAAAACATAGTAACCCACTTGATATAGGCTCCTCTAAATTCAATGAGCAACTTAATAGAGGACAGCTGAAACTTCACTGTGAAGAGCCTTCTAACAAGTCAAGATGCAAAGGTCCTTTTCAGTCTGATGCTGTTATTAGCACATATGATTTGCGTATTCATGGTGGAGAATTTGAAGCCTCCAATAGAAGAGCCAAGCCCTCAGATACTGAAAGCAAAGCTATAAATGATAATGAAGAACTGCCATCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGATTACAATTCAGGATGAGCGTAATGTTTTAAGACGTTCAGACCTTTCAGCCTTTTCAAGGTATAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCTGGAAGCCATTCTCCCCAGAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATCCAATCGCATTCTAGTGGGAATCCCCCTAACCAGAACTCAAATGGTGCCAGCAATAACATAGACATGGGCTCCACCACTGATAACGCTTTCACTAAATCTGCTGTTATGAGCAAGATAACTGTGGCGTCACCTGGTAAATGTTTGTACCAATGTTCTGCCTTCCAGCCTATAAAAAACAACTTCATGTGCACCTCTCAACAAGTTGCAGTACATAATACTGAAGATATGACAGCCTCAACTATGCTAGAACCTCCTAGAGGAGGGACACACAAAGACTCTCCAACACAGGACTTCCACAGCATATACAACAACCATAGCTGCATTGTTAACAACATGCAGCATCAGGTAACTCTGGACCATGATGATGCATCATCAAAGAAAATTGCTGCCAGTGCTCCACACCATGGGTCATCAAATGTAGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGCGTGTCAAGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTCAATGCTGGAGGGATAAACATAGAAAATAACAATGGAATTGCTGGGAATAGTCGAGGTGGTGATGCTAGTGGGAGCGGGAGCGCTAACAGAATAGATCAGAAGAAGACTTCTCAAAGAGAAGCTGCCTTAACAAAATTTCGCCAGAAGAGGAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAGAAATTAGCTGAACAACGACCTCGCTTTCGTGGACAATTTGTTCGGCAGGCTACAAGTGAGACAGAGGAAGCAACTGACAACTGA 2313 0.428 MTRDVLMSIDGDDKEFQELAQRLRDGKKTTKEGVVGDVHSFREDDELKSNGTAEEVKVGQDGILDAPAVRHMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLCNCSYEVIEAANGLQAWKILEDLTNQIDLVLTEVAMPCLSGIGLLSKIMAHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLERSDNSGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQVVLSNAEIGGNKMFSVAIKECPDQKDQLELKVDSSRDLGLILDYRNEVLTNNLGEKHSNPLDIGSSKFNEQLNRGQLKLHCEEPSNKSRCKGPFQSDAVISTYDLRIHGGEFEASNRRAKPSDTESKAINDNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSHSPQNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKITVASPGKCLYQCSAFQPIKNNFMCTSQQVAVHNTEDMTASTMLEPPRGGTHKDSPTQDFHSIYNNHSCIVNNMQHQVTLDHDDASSKKIAASAPHHGSSNVVEGNVGNYSINRSVSSSNNGSNGQNGSSTAVNAGGINIENNNGIAGNSRGGDASGSGSANRIDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQATSETEEATDN 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02331 770 SUPERFAMILY CheY-like 89 215 IPR011006 -
Accr5g02331 770 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 311 IPR045279 GO:0009736
Accr5g02331 770 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
Accr5g02331 770 MobiDBLite consensus disorder prediction 711 726 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 215 232 - -
Accr5g02331 770 FunFam Two-component response regulator-like PRR37 91 249 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 644 710 - -
Accr5g02331 770 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Accr5g02331 770 MobiDBLite consensus disorder prediction 508 532 - -
Accr5g02331 770 CDD psREC_PRR 93 196 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 628 729 - -
Accr5g02331 770 Gene3D - 90 250 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 215 287 - -
Accr5g02331 770 Pfam CCT motif 717 759 IPR010402 GO:0005515
Accr5g02331 770 SMART REC_2 91 206 IPR001789 GO:0000160
Accr5g02331 770 ProSiteProfiles CCT domain profile. 717 759 IPR010402 GO:0005515
Accr5g02331 770 MobiDBLite consensus disorder prediction 477 532 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 741 770 - -
Accr5g02331 770 MobiDBLite consensus disorder prediction 246 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02331 Accr-Chr5 49574010 49581453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02331 167 766 Response Regulator Gene Family AT5G02810 47.611 3.76e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr5g02331 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02331 K12129 - gmx:100806454 978.008