Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02325 ATGGCTGAAGCTCCGGCCAGTCCTGGCGGTGGCAGCCACGAGAGCGGTGAGCATAGCCCTCGCTCTAATGTCCGCGAGCAGGACAGGTTCCTTCCCATCGCCAATATCAGCCGAATTATGAAGAAGGCACTCCCTGCTAATGGAAAAATAGCCAAGGAGTCCAAGGAGATTGTGCAGGAATGCGTTTCAGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGAGAGAAGAGGAAGACAATTAATGGTGATGATTTGCTTTGGGCGATGGCTACTCTAGGTTTTGAGGATTATATTGATCCCCTGAAGGTTTACCTGGCCAGATATAGAGAGATGGAGGGTGATACCAAGAGTTCGGTGAAGGGCGGAGATGCATCGGCCAAGAAAGATGCCCAACCTAGTCCTAATGCTCAGCTTACCCATCAAGTTTCTTTTCCCCAAGGTGTTAACTACACAAATTCTCAGGATCAACATATGATGGTTCATACTCATGGTCCAGAATAG 516 0.4864 MAEAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKESKEIVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYREMEGDTKSSVKGGDASAKKDAQPSPNAQLTHQVSFPQGVNYTNSQDQHMMVHTHGPE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02325 171 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Accr5g02325 171 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Accr5g02325 171 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Accr5g02325 171 Gene3D Histone, subunit A 16 159 IPR009072 GO:0046982
Accr5g02325 171 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Accr5g02325 171 MobiDBLite consensus disorder prediction 1 27 - -
Accr5g02325 171 MobiDBLite consensus disorder prediction 135 164 - -
Accr5g02325 171 SUPERFAMILY Histone-fold 27 130 IPR009072 GO:0046982
Accr5g02325 171 MobiDBLite consensus disorder prediction 119 171 - -
Accr5g02325 171 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Accr5g02325 171 FunFam Nuclear transcription factor Y subunit B-3 19 143 - -
Accr5g02325 171 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02325 Accr-Chr5 49526127 49529296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02325 1 165 CCAAT-HAP3 Transcription Factor Family AT2G37060 76.879 3.13e-85 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr5g02325 CBFD_NFYB_HMF 1.5e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02325 K08065 - gmx:100798667 298.13