Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02320 ATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCTGAATCGAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGGCTTCAGAGTCATACATGGAAACTGATACTGCACCACCTCTTCCTCCACCAGAAGAGGTCAAATTAACTAATATTGAGAGTGAAAACAATCGTGCTCCAGATGTCGAAGTTGCAATTGCTGCAGTTTCTGAGGAGTCTGTTCCTGCCGTTCAAACAGCCCCTGTTCCAGTTCAAGCTGCTATAATTCCTCAGTCTTCTAGGAAATTAAGTACTGAAGTAGCAGCAATTAAGATTCAAACAGCATTCCGAGGATACTTGGCAAGAAGAGCATTGAGGGCTTTAAGAGGCCTGGTTAGGTTGAAGTCTCTGATGGAAGGGCCAGTTGTAAAACGCCAAGCTGCTAGTACTCTCCGCTCTATGCAGGCTCTAGCTCGTGTGCAATCTCAGATTCGAGTTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAGGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCAAAGGACCAAATTGAAGCCAAGTTACTGAGCAAGTATGAGGCCACAGTGAGAAGAGAAAGGGCACTGGCTTATGCATTCTCTCACCAGCAAAATGGGAAGAACTCATCTAGATCTATAAATCCTGTATTTCTGGATCCAACCAACCCGACGTGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGACCCTGGGAGAGCAAAGATGTGAATGACCAGTCATCAGTCAAAAGCTCGGGCCGCAGCATCACTGGCGGAGAAATCAGTAAATCCTTTGCTCGTTACCAGCTCAATTCTGAAAAGTACTCTCCAACGGCCAGCCAAAACCTAGGCTCCCCTAACTTTCACTCCAACTCAACTCCTTCCAAGGCACTTGCTTCTTCAGCATCAGTTGCCAAAAAACTGAAGAAAGTGAGCCCAAAGGAAACCTCTGTTATTGATGATGATTCTAAAAGCATGGTTAGTGTGCAGTCCGGTTTTCGGAGGCACTCCATTGCTGGATCATCTGTGAGAGATGACGAGAGCCTTGCAACCTCTCAGGTGGTTCCGAGCTACATGGTGCCAACTCAGTCTGCAAAGGCCAAGTCTAAGACACTCAGTCCATTAACAGTAGAGAATGAAACAGTAGAGAAGGGATCCTCTGGGACAGCGAAGAAACGGCTTTCTTTCCCTCCTTCGCCGGCAAAGCCAAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTGAATGCAGAGGTCACTGTCGGGAATGGTGTGGCTGGTTGA 1401 0.4711 MGRKGNWFSSVKKALSPESKKREDERSNKSKKKWFGKQKLQASESYMETDTAPPLPPPEEVKLTNIESENNRAPDVEVAIAAVSEESVPAVQTAPVPVQAAIIPQSSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVKRQAASTLRSMQALARVQSQIRVRRIRMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKDQIEAKLLSKYEATVRRERALAYAFSHQQNGKNSSRSINPVFLDPTNPTWGWSWLERWMAARPWESKDVNDQSSVKSSGRSITGGEISKSFARYQLNSEKYSPTASQNLGSPNFHSNSTPSKALASSASVAKKLKKVSPKETSVIDDDSKSMVSVQSGFRRHSIAGSSVRDDESLATSQVVPSYMVPTQSAKAKSKTLSPLTVENETVEKGSSGTAKKRLSFPPSPAKPRRHSGPPKVESSLNAEVTVGNGVAG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02320 466 MobiDBLite consensus disorder prediction 1 58 - -
Accr5g02320 466 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Accr5g02320 466 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Accr5g02320 466 MobiDBLite consensus disorder prediction 399 466 - -
Accr5g02320 466 MobiDBLite consensus disorder prediction 15 31 - -
Accr5g02320 466 SMART iq_5 111 133 IPR000048 GO:0005515
Accr5g02320 466 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Accr5g02320 466 MobiDBLite consensus disorder prediction 314 338 - -
Accr5g02320 466 MobiDBLite consensus disorder prediction 399 422 - -
Accr5g02320 466 Gene3D - 98 138 - -
Accr5g02320 466 MobiDBLite consensus disorder prediction 314 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02320 Accr-Chr5 49491287 49493709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02320 1 465 IQD Protein Family AT5G03040 52.016 1.32e-139 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02320 - - gmx:100800080 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02175 2 56690653 56692610 Accr5g02320 5 49491287 49493709 CCT
Accr5g02320 5 49491287 49493709 Accr5g02320 5 49491287 49493709 ECH