Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02308 ATGAGCGTCATCGACATTCTGACCAGAGTTGATTCGATCTGTAAGAAGTACGACAAATACGACGTTGATAAGCACAAGGATACTAATATTTCTGGCGACGATGCCTTTGCTCGACTATACGCCGTCGTCGACGCCGATATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCATCTACCGTGGCGATCAACGCGGAGCTGCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGGTTGGCGGTCAAAAAGGTAAAGGGGCTTCAACCTGAAGAATTTGCTGCACGTAATGATTTGGTTCTTGCATTGCCAGAGAGGATCCAAGCTATCCCGGATGGGGCTCCAGCTGCCCCCAAACGAACTGGAGGCTGGGCAGCTTCTGCTTCACGTACTGAAATTAAATTTGATTCAGATGGGCAATTTGACAGTGAATACTTCCAGCAAACTGAGGAATCGAGTGGATTTAGGCAGGAGTATGAAATGCGTAGGATGAAGCAGGATCAAGGTTTGGAGGTAATCTCAGAAGGATTGGATAGGTTGAAAAATATGGCACATGATATGAACGAGGAAATGGATAGACAAGTCCCATTGATGGATGAGATTGATACTAAGGTGGACAAGGCATCCTCTGATCTTAAGAATACCAATGTCAGACTTAAAGACACGGTCATGCAGCTTCGATCCAGTAGAAACTTCTGTATTGATATTGTGTTATTGATTATAATTCTGGGAATTGCTGCCTATCTGTACAATGTACTGAAGAAATGA 798 0.4561 MSVIDILTRVDSICKKYDKYDVDKHKDTNISGDDAFARLYAVVDADIEAALQKAETASKEKNRASTVAINAELRRTKARLLEEVPKLQRLAVKKVKGLQPEEFAARNDLVLALPERIQAIPDGAPAAPKRTGGWAASASRTEIKFDSDGQFDSEYFQQTEESSGFRQEYEMRRMKQDQGLEVISEGLDRLKNMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVMQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02308 265 FunFam Putative syntaxin-71-like 170 231 - -
Accr5g02308 265 PANTHER SYNTAXIN 45 252 IPR045242 -
Accr5g02308 265 Coils Coil 180 200 - -
Accr5g02308 265 Coils Coil 70 90 - -
Accr5g02308 265 CDD SNARE_Qc 175 230 - -
Accr5g02308 265 Gene3D - 170 231 - -
Accr5g02308 265 SMART tSNARE_6 165 232 IPR000727 -
Accr5g02308 265 SUPERFAMILY SNARE fusion complex 164 230 - -
Accr5g02308 265 Pfam SNARE domain 207 256 IPR000727 -
Accr5g02308 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02308 Accr-Chr5 49324778 49327368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02308 1 264 SNARE and Associated Proteins AT3G09740 77.068 2.15e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02308 K08506 - gmx:100819272 447.203