Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02306 ATGCTCAAACTTCTGTGTTTATCGTCCGCCATGGATGCGGTAGGTTGGAGAGGATTGCTCTACGCAATCTCCATTCTTAATTTTGTTTTGGTATGTCAGCTCGTTCTCCTCCAACCTCTGGTTTCCTCTTTAGAGGGAAAACCTGGAAATGCTGCTGAGTTATTTGAGAGGGTGTCACAGAGTATAAAAGTGAAACGTTATACTGAGGCGCTTGATGATTTAAATTCCGCCATTGAAGCAGATCCAACCCTTTCAGAAGCATACCTTCGCCGTGCATCCCTTCTTCGTCAGATATGCAGATACAAGGAATCTGAGGGGAGCTACAGAAAGTTTTTGGAGTTGAAACCTGGAAATTCAGCAGCAGAAAAGGAGCTCTCTCAGTTGTTACAGGCCCAAAGTGCTCTAGAAACGGCTCAGTCATTCTTTGATTCGGGCAATTTTTCAAAATCCTTGGAATACATCAATAAAATTGTACTTGTTTTCTCTCCTGAATGCTCAAAGGCCAAGCTTCTCAGAGTAAAGCTATTGATAGCTGATAAATACTATGAAGAGGCCATTGCGGAGTCTGGATTCATTCTTAAGGAAGATGAGAATAATTTAGAGGCACTGTTGCTCCGGGGGCGTGCATACTACTATTTGGCTGATCACGATGTTGCCATGAGGCATTACCAGAAAGGTCTCCGCCTAGACCCTGAGCACAGTGAACTGAAAAAAGCATATTTTGGGATGAAAAATCTACTGAAAAAGAGTAAAAGTGCTGAGGATAATGTCAGTAAGGGTAAACTGCGTGTGGCTGTTGAGGAATTCAAGGCAGCACTGGCAGTTGATCCTAATCATCTTGCGCATAATGTAAATCTTCATCTTGGCTTATGTAAAGTTTTGGTCAAACTCGGTAGGGGAAAAGATGCTTTGAACAGTTGTGATGAAGTTCTTAAGATCAATGAGGAACTCGTTGAAGCTCTTGTTCAGAGGGGAGAAGCTAAACTTCTAACAGAGGATTGGGAGGGAGCTGTGCAAGATCTGAAATCAGCCGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGTTTTGATGAGAGCTGAAAAGGCTTTAAAGATCAGCAAGCGCAAAGATTACTACAAGATTCTGGGAATTTCAAAAACGTCTTCTATGTCTGAGATAAAACGTGCCTACAAGAAACTTGCTTTGCAATGGCACCCTGATAAGAACGTGGAGAACAGGGAAGAAGCAGAGGCGAAGTTCCGAGAAATTGCTGCTGCATATGAGGTTCTGAGCGACGAAGATAAGCGAACCAGATATGATAGAGGAGAAGACCTTGAAGACATGGGAATGGGTGGGGGAGGCGGAGGCGGAGGTTTCAACCCCTATGGTGGAGGGGGCCAACAGTATACCTTTACTTTCGAGGGAGGCTACCCTGGTGGCTTTGGCGGAGGGTTTCCTGGTGGATTTGGCGGCGGCGGTGGCGGCTTTGAGTTTCATTTTTGA 1488 0.4449 MLKLLCLSSAMDAVGWRGLLYAISILNFVLVCQLVLLQPLVSSLEGKPGNAAELFERVSQSIKVKRYTEALDDLNSAIEADPTLSEAYLRRASLLRQICRYKESEGSYRKFLELKPGNSAAEKELSQLLQAQSALETAQSFFDSGNFSKSLEYINKIVLVFSPECSKAKLLRVKLLIADKYYEEAIAESGFILKEDENNLEALLLRGRAYYYLADHDVAMRHYQKGLRLDPEHSELKKAYFGMKNLLKKSKSAEDNVSKGKLRVAVEEFKAALAVDPNHLAHNVNLHLGLCKVLVKLGRGKDALNSCDEVLKINEELVEALVQRGEAKLLTEDWEGAVQDLKSAAQKSPQDMNIREVLMRAEKALKISKRKDYYKILGISKTSSMSEIKRAYKKLALQWHPDKNVENREEAEAKFREIAAAYEVLSDEDKRTRYDRGEDLEDMGMGGGGGGGGFNPYGGGGQQYTFTFEGGYPGGFGGGFPGGFGGGGGGFEFHF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02306 495 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Accr5g02306 495 FunFam DnaJ subfamily C member 7 370 487 - -
Accr5g02306 495 Pfam Tetratricopeptide repeat 64 119 - -
Accr5g02306 495 ProSitePatterns Nt-dnaJ domain signature. 415 434 IPR018253 -
Accr5g02306 495 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Accr5g02306 495 ProSiteProfiles dnaJ domain profile. 372 438 IPR001623 -
Accr5g02306 495 Pfam Tetratricopeptide repeat 201 233 IPR013105 -
Accr5g02306 495 Pfam Tetratricopeptide repeat 260 316 - -
Accr5g02306 495 FunFam DnaJ domain containing protein 38 369 - -
Accr5g02306 495 PRINTS DnaJ domain signature 392 407 IPR001623 -
Accr5g02306 495 PRINTS DnaJ domain signature 374 392 IPR001623 -
Accr5g02306 495 PRINTS DnaJ domain signature 410 430 IPR001623 -
Accr5g02306 495 PRINTS DnaJ domain signature 430 449 IPR001623 -
Accr5g02306 495 SUPERFAMILY TPR-like 44 354 IPR011990 GO:0005515
Accr5g02306 495 Gene3D Tetratricopeptide repeat domain 40 367 IPR011990 GO:0005515
Accr5g02306 495 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 23 495 IPR044620 -
Accr5g02306 495 CDD DnaJ 372 427 IPR001623 -
Accr5g02306 495 Gene3D DnaJ domain 368 448 IPR036869 -
Accr5g02306 495 Coils Coil 118 138 - -
Accr5g02306 495 SUPERFAMILY Chaperone J-domain 366 474 IPR036869 -
Accr5g02306 495 Pfam DnaJ domain 372 435 IPR001623 -
Accr5g02306 495 SMART tpr_5 200 233 IPR019734 GO:0005515
Accr5g02306 495 SMART tpr_5 51 84 IPR019734 GO:0005515
Accr5g02306 495 SMART tpr_5 85 118 IPR019734 GO:0005515
Accr5g02306 495 SMART tpr_5 284 317 IPR019734 GO:0005515
Accr5g02306 495 SMART tpr_5 318 351 IPR019734 GO:0005515
Accr5g02306 495 Coils Coil 408 428 - -
Accr5g02306 495 SMART dnaj_3 371 430 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02306 Accr-Chr5 49297172 49302139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02306 368 435 C2H2 Transcription Factor Family AT1G74250 48.611 1.12e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02306 K09523 - qsa:O6P43_006678 718.383