Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02302 ATGGGTAACATAGGAAGTAGTGGTGGTAACGACAACCGCCGCAGGCACAACGCGAGTGGCAGGAGGAGTCATCCGCCTCCCCCTCCGCCGGTGACCCCACAGCCGGAAATCACCGTCAATCGATTTGTCCATCCCGGTGGTCCACCTTATCCACCACAATTCTCAAATTCGAATCCTCCGCCGTACCAGTACCCGGGTTTCTATCCCCCACCGCCGACGACCATGCCGCTTCCTCTGCCACCTCCTTTTGATCAGCATCATCGTATGGTTTCTCATTCACATGTGGACCCAGTATGGATGGGCGGACGTTACCCTTATGGCCCTGTGATGCTTCCTCCTCCGCCCTATGTGGAGCATCAGAAGGCGGTTACGATAAGGAACGATGTTAATATCAAGAAGGAAACTCTGAGGATTGAGCCCGATGAGGAAAATCCGGGGCGGTTCCTTGTGGCATTCACATTTGACGCCACTGTGGCCGGGAGCATCACCATACTTTTCTTTGCAAAAGAAGGTGATGGATGCATTCTTACGCCAACAAAGGAAAACCTTCTAGCACCTGTAACTGTGCATTTCGAGCAGGGTCTTGGCCAGAAGTTTAGACAGCCAGCTGGAACTGGTATTGACTTTTCAGTATTTGAAGAATCGGAATTATTAAGAAGTGACAATGATGTCTACCCTCTAGCAGTGAAGGCAGATGCATCCTCTGATAATCATGAAGGATCCAATGAAACTCTTACACCTGGTGGCACAAACTCTCAGATTACTCAAACAGTCTTTGAGAAAGAGAAAGGAGAGTTCCGGGTGAGGGTAGTTAAGCAGATCCTGTGGGTGAATGGAATGAGATATGAGTTGCAGGAGATATATGGTATTGGTAACTCAGTGGAGAATGATTTGGATGGAAATGACCCAGGAAAAGAGTGTGTCATCTGCTTATCAGAGCCTCGGGATACAACTGTTCTTCCCTGTCGCCACATGTGCATGTGTAGCGGATGTGCGAAGGTTCTGAGGTTCCAGACAAACAGGTGCCCAATTTGCAGACAGCCAGTTGAGAGGCTTTTGGAGATAAAAGTCAACAACGGGCCAGAAGATGCAGCAACACAGGTGTGTCAAGATTCCTGTACAGTGTAG 1128 0.4929 MGNIGSSGGNDNRRRHNASGRRSHPPPPPPVTPQPEITVNRFVHPGGPPYPPQFSNSNPPPYQYPGFYPPPPTTMPLPLPPPFDQHHRMVSHSHVDPVWMGGRYPYGPVMLPPPPYVEHQKAVTIRNDVNIKKETLRIEPDEENPGRFLVAFTFDATVAGSITILFFAKEGDGCILTPTKENLLAPVTVHFEQGLGQKFRQPAGTGIDFSVFEESELLRSDNDVYPLAVKADASSDNHEGSNETLTPGGTNSQITQTVFEKEKGEFRVRVVKQILWVNGMRYELQEIYGIGNSVENDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNGPEDAATQVCQDSCTV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02302 375 MobiDBLite consensus disorder prediction 45 60 - -
Accr5g02302 375 ProSiteProfiles Zinc finger RING-type profile. 307 346 IPR001841 -
Accr5g02302 375 PANTHER MAHOGUNIN 1 359 IPR045194 GO:0061630
Accr5g02302 375 MobiDBLite consensus disorder prediction 238 252 - -
Accr5g02302 375 MobiDBLite consensus disorder prediction 232 252 - -
Accr5g02302 375 CDD mRING-HC-C3HC5_MGRN1-like 305 346 IPR045195 -
Accr5g02302 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 356 IPR013083 -
Accr5g02302 375 FunFam probable E3 ubiquitin-protein ligase LOG2 291 356 - -
Accr5g02302 375 MobiDBLite consensus disorder prediction 1 60 - -
Accr5g02302 375 Pfam Zinc finger, C3HC4 type (RING finger) 305 351 - -
Accr5g02302 375 SMART ring_2 307 345 IPR001841 -
Accr5g02302 375 SUPERFAMILY RING/U-box 306 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02302 Accr-Chr5 49263032 49265682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02302 97 326 C3H Transcription Factor Family AT3G09770 66.667 4.15e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02302 - - cmax:111482503 512.301