Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02301 ATGAAGATTCTCTGTTCTTTGTCTACTTGTTTCTCACCATCGTTTCAAGACCAAACGACCCATCAAGGAAGAGAGAGTGAAGCAACATTTCGAATATTCACGCACAGCGAATTAAAATCTGCGACCAGGAGTTTCGATTCCTCAAACAAGATCGGAGAAGGCGGTTTTGGCACTGTGTACAAGGGGCGGCTTCGGGATGGCACATTTGTGGCGGTCAAAGTTCTTTCTATCGAACTGGATTCCTTGCGAGGAGAGAAGGAATTTGTGGCAGAACTGGGCACGCTGGGCGATATCAAGCACCAGAATCTAGTTACTCTCCGAGGTTGTTGTGTGGAAGGAGCTCACAGATACTTAGTCTACGAGTACATGGAAAACAACAGCCTTCACCGCTACTTTTTAGGTTCACAGGAGGGGAGGATGAGATTTAGCTGGGAATCAAGGAGGGAAGTAGCCATAGGAGTGGCTCGAGGGCTTGCCTATCTTCACGAGGAAATTAAGCCCCATGTTGTGCACAGGGACATCAAAGCCAGAAACATACTTCTTGATCAAAATTTAAGGCCCAAAGTTTCAGACTTTGGTCTGGCAAAGTTATTGAGAGACGACAAGTCTTACGTTTCTACTCAAGTCGCGGGGACATTGGGTTATCTTGCTCCGGAATATGCCAGTTCTGGGAAGGTGACACGAAAATCAGATGTTTACAGCTACGGAATATTACTCCTACAAATTGTGAGCGGCCTACCAGTGGTTGATCCTTACCAGGACAAGCAACGTTTCCTGGTTGAGAAGGCGTGGGCGGCGTATGAAGCAGGGGATTTAACAAAAATGGTGGATGCAGAGCTAAATGAAGAAAGCGTAGCAGAGGAAGAAGAAAGCATCAGATTCTTGAAGGTGGGGTTGCTTTGCACGCAAGAAACAGCGAAGCTGAGGCCAAGAATGTCAGAAGTGGTTGAAATGTTGAGCAACAAGATTGAAATGTTAAACGTGAGTATTTCAAAACCAGGGCTTGTTCCTGATCTTAGGGCTATCAGAACTAGAAACGCGCCCCATTCTGAGGTTTCCACTTCCAGTGCTGCAGCCCATGCATCTTCCATTTGGAGTTCCTCCAATCTTGCCCGTTAA 1119 0.4656 MKILCSLSTCFSPSFQDQTTHQGRESEATFRIFTHSELKSATRSFDSSNKIGEGGFGTVYKGRLRDGTFVAVKVLSIELDSLRGEKEFVAELGTLGDIKHQNLVTLRGCCVEGAHRYLVYEYMENNSLHRYFLGSQEGRMRFSWESRREVAIGVARGLAYLHEEIKPHVVHRDIKARNILLDQNLRPKVSDFGLAKLLRDDKSYVSTQVAGTLGYLAPEYASSGKVTRKSDVYSYGILLLQIVSGLPVVDPYQDKQRFLVEKAWAAYEAGDLTKMVDAELNEESVAEEEESIRFLKVGLLCTQETAKLRPRMSEVVEMLSNKIEMLNVSISKPGLVPDLRAIRTRNAPHSEVSTSSAAAHASSIWSSSNLAR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02301 372 Pfam Protein kinase domain 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02301 372 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Accr5g02301 372 SMART serkin_6 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02301 372 CDD STKc_IRAK 51 319 - -
Accr5g02301 372 FunFam Cysteine-rich receptor-like protein kinase 2 123 327 - -
Accr5g02301 372 ProSiteProfiles Protein kinase domain profile. 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02301 372 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 363 - -
Accr5g02301 372 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Accr5g02301 372 FunFam Serine/threonine-protein kinase receptor 15 122 - -
Accr5g02301 372 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Accr5g02301 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Accr5g02301 372 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02301 Accr-Chr5 49252288 49253909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02301 33 364 Receptor kinase-like Gene Family AT1G56120 48.949 1.00e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g02301 Pkinase 8.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02301 - - gmx:100813945 472.626