Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02296 ATGCTTACATTTCTGGATGTGAAGGATGAATTGAAGGAAGAGGAAAAATGCTTGAACAGTCTACTGTGGCATGCTTGCGCTGGCGGCATGGTACAAATGCCGTCGTTGAACTCTAAGGTGTTTTACTTCCCTCAGGGCCACGCAGAGCATGCAAGTGGCCCCGTCGATTTCAAGAAATGCCGGAGGTTTCCTCTTCCGCCCTACATTTTATGCAGAGTTGACTCTGTTGAATACATGGCTGATCCCGATACAGATGAGTTATATGCCAAGCTTAGGCTTGTTCCTTTGAATCTGGAGGAGGTCAATTATGATGAGGGCTGCGGCGGGGCCGATGGATCTGAATCTCAAGAGAGACTTACTCACTTCACAAAAATTTTGACGCAGTCAGACGCCAACAATGGCGGTGGCTTTTCTGTTCCTAGATTCTGCGCGGAGACCATTTTTCCTCCTCTGAACTTCAAAGCGGTGATACCCCTTCAGTGTATTGAGGCTAAAGACGTTCATGGCGAATCGTGGAAGTTCAAGCACGTTTACAGAGGCACACCGAGGCGGCATCTTTTGACCACAGGATGGAGTCCATTTGTGAACAAGAAAAGGCTCGTTGCAGGAGATTCAATAGTATTTTTATGCAACGATAATAAAGATATCTACGTAGCGGTTCGAAGGGCTAAAAGAAGAAATGGCCGTCCATTTAAGTCATCGTCACTACCTTGCCAAAGATTTTCTGCCTCGTTGATTGGGAATGATAGCAAAAAAGCAGCAATCAATCATGGTACAGGCAATAGGAAAGTAAAAGCCGAAGCAGTTATTGAAGCTGCGAATCTCGCTGCTGAGGGACAGCCCTTTGAAGTTGCGTACTACCCTAGAATAGGCACCCCTGAGTTCTGTGTAAAAGCCTCTTCAGTTAAAACGGCTATGCAAGTTCGGTGGTGTTCTGGAATGAGGTTCAAGATGGCTTTTGAAACAGAGGATTCACGAATAAGATGTTTTATGGGAACTGTATCTTCGGTGCAGGTTGCTGATTCTCTAGTTTGGCCTCATTCACCTTGGAGGCTTCTCCAGGTTACTTGGGATGAACCAGGATTAGTTCAGGATGTGAAACGGGTGAGCCCATGGTTGGTTCAATTGGTGTCGAACCTGCCTACAATTCCTCCACCTTTTTCACCACCAAGGAAGAAAATGAGGCTGCCTCAGTATCCAGATGTTCCACTTGATACCCATCAGATTTATGCGCCCACATTTGTTGGCAGCCTTCTAGGTTCCACGAACAACCCCTTTGGGTATTATGTACCGGAAACCACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTTATTGTGGTCTACCCTTGGTAGATTTCGACCTCAATAATTTGCAGTTGCCTCTGTATTTGACTGGTTTACCACCTCTTGCTCAAGCTTCTATGCGAAACATGGTAAGTTATAACCCAGCAATGCAAAATCATGCCATGAGTGAGAATGTTTCTCACTTCATTTCCAATGAAGATTCTTCTCCGTCTTCGGAGGAACAGGATCGTGATAACAAAAGACCCTACATTGTGCTTCTTGGGAAAAAAATATCCACGAGCTACTCTCAAGACGGTGTCTCCCAAGTTTTATATGGAAATGCTCGTAAAGGGCCCAACTTTTTTGATGGTAGAGAGCCAAGAGTCTGA 1674 0.4582 MLTFLDVKDELKEEEKCLNSLLWHACAGGMVQMPSLNSKVFYFPQGHAEHASGPVDFKKCRRFPLPPYILCRVDSVEYMADPDTDELYAKLRLVPLNLEEVNYDEGCGGADGSESQERLTHFTKILTQSDANNGGGFSVPRFCAETIFPPLNFKAVIPLQCIEAKDVHGESWKFKHVYRGTPRRHLLTTGWSPFVNKKRLVAGDSIVFLCNDNKDIYVAVRRAKRRNGRPFKSSSLPCQRFSASLIGNDSKKAAINHGTGNRKVKAEAVIEAANLAAEGQPFEVAYYPRIGTPEFCVKASSVKTAMQVRWCSGMRFKMAFETEDSRIRCFMGTVSSVQVADSLVWPHSPWRLLQVTWDEPGLVQDVKRVSPWLVQLVSNLPTIPPPFSPPRKKMRLPQYPDVPLDTHQIYAPTFVGSLLGSTNNPFGYYVPETTPAGMQGARHAYCGLPLVDFDLNNLQLPLYLTGLPPLAQASMRNMVSYNPAMQNHAMSENVSHFISNEDSSPSSEEQDRDNKRPYIVLLGKKISTSYSQDGVSQVLYGNARKGPNFFDGREPRV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02296 557 ProSiteProfiles B3 DNA-binding domain profile. 122 224 IPR003340 GO:0003677
Accr5g02296 557 CDD B3_DNA 121 222 IPR003340 GO:0003677
Accr5g02296 557 SUPERFAMILY DNA-binding pseudobarrel domain 118 225 IPR015300 -
Accr5g02296 557 FunFam Auxin response factor 310 382 - -
Accr5g02296 557 Pfam B3 DNA binding domain 122 223 IPR003340 GO:0003677
Accr5g02296 557 Gene3D - 309 381 - -
Accr5g02296 557 SMART B3_2 122 224 IPR003340 GO:0003677
Accr5g02296 557 Pfam Auxin response factor 272 354 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr5g02296 557 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 534 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr5g02296 557 FunFam Auxin response factor 120 224 - -
Accr5g02296 557 Gene3D - 119 224 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02296 Accr-Chr5 49212793 49214550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02296 15 453 B3 DNA Binding Superfamily AT4G30080 56.798 2.84e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr5g02296 B3 2.2e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02296 - - cave:132192247 627.476