Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02287 ATGAAGTGGTTTTCATGCTATTACGGAGTTAAGAAGGATGATCCGAAGAGCATTAAGTCCGTTTCGGGTCTGTCTAACTATTCCGCGTATGGCGAGTGTGATCTGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGTTTCCGACAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGATCCAGCAACCTGAGAGTGTTTACTGTGTCTGAACTGAAATCAGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGAGAGGGTGGGTTTGGCTGTGTCTACAAGGGATTGATCAAGAGCTTAGAGGACCCATACAAAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTAAAACTTGTGGGTTATTGTGCTGAGGATGATGAAAGAGGAATCCAACGGCTTTTGGTTTATGAATATATGCCCAACAGAAGTGTGGAGCACCATTTATCCACCCGATCAGAGGCCCCTCTCTCATGGAGTAGGAGATTAAAAATAGCTCAGGATGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCTAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGTCCATCAGAAGGGTTAACTCACGTCTCAACAGCGGTTGTGGGAACAATGGGATACGCTGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGTGATGTGTGGGGTTATGGCGTATTTCTCTATGAACTCATCACTGGGAGGCGCCCTGTGGATCGAAATCGTCCCAAGGGTGAACAAAAGCTCTTGGAGTGGGTAAGGCCATACCTATCAGATGGGAAAAAATTTCAACTAATATTGGATCCAAGGCTTGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTTGCCATTATAGCTAACCGATGCTTGGTCAAAAACCCAAAGAATCGCCCAAAAATGAGTGAGGTGTTGGAAATGGTGAATCGAGTTGTAGAATCTTCGACTGCCACTAGTCCACTGATACCCCTGAAGAGTTCGGAATCCGCTGAAGTTTTGCAGGGCACTGAAACCGAGAAAAAGAGGAGGATAATGGATCTAAAACCGGGAGAAAATAGTTGGTTTTTTTGGTTGTGGAGACCAAAGCTTTTAAAAGTATGTTGA 1278 0.4288 MKWFSCYYGVKKDDPKSIKSVSGLSNYSAYGECDLRRSGSELNSQNVSDNSTDSLRRTSFPSLSQRSSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGLIKSLEDPYKKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCAEDDERGIQRLLVYEYMPNRSVEHHLSTRSEAPLSWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWGYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLFKSAQRLAIIANRCLVKNPKNRPKMSEVLEMVNRVVESSTATSPLIPLKSSESAEVLQGTETEKKRRIMDLKPGENSWFFWLWRPKLLKVC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02287 425 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Accr5g02287 425 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02287 425 MobiDBLite consensus disorder prediction 40 62 - -
Accr5g02287 425 Pfam Protein tyrosine and serine/threonine kinase 90 364 IPR001245 GO:0004672|GO:0006468
Accr5g02287 425 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Accr5g02287 425 Gene3D Transferase(Phosphotransferase) domain 1 171 380 - -
Accr5g02287 425 PANTHER OS01G0588500 PROTEIN-RELATED 52 368 - -
Accr5g02287 425 FunFam Serine/threonine-protein kinase PCRK2 171 378 - -
Accr5g02287 425 CDD STKc_IRAK 91 368 - -
Accr5g02287 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Accr5g02287 425 FunFam Serine/threonine-protein kinase BIK1 51 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02287 Accr-Chr5 49104968 49107328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02287 1 363 Glycoside Hydrolase AT3G07070 43.164 2.00e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr5g02287 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02287 - - qsa:O6P43_010275 709.138