Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02239 ATGGATCGTGAATGGGGTTCGAAGCCTGGCAGTGGAGGCGCTGCCTCCGCCCAGAACGAGGCCATCGACCGTCGTGAGCGTCTCCGCCGACTTGCGCTCGAGACTATTGATCTTGCTAAAGACCCCTATTTCATGCGCAATCATCTTGGCAGCTATGAGTGCAAGCTTTGTCTCACTTTGCACAATAATGAAGGGAATTATCTGGCGCACACACAGGGTAAGCGGCATCAGACCAATTTGGCTAAGAGAGCAGCTCGCGAGGCCAAAGAGGCACCTGCTCAACCTCAGCCCCACAAGCGTAAAGTCTCCGTTCGCAAGACAGTCAAGATTGGTAGACCTGGGTACCGAGTGACCAAGCAATATGATCCAGAGACAAATCAGAGATCCCTTCTTTTCCAGATTGAATATCCTGAGATTGAAGACCTAACAAAGCCAAGGCATCGATTTATGTCTTCTTATGAGCAGAGAGTGCAACCCTTTGATAAAAGATATCAGTATCTTTTGTGCGCAGCTGAACCATATGAAACCATAGCTTTCAAGGTTCCCAGCACTGAGATTGATAAGACAACTCCAAAGTTTTTCTCACACTGGGACCCAGACACAAAGATGTTTACGTTGCAACTGTATTTCAAACCGAAGCCACTGGAGGCAAACAAACCCCAGCCTCCCTCAACAGCCAATAGCACTGCTGCACCTGGTGTCCCTCCACCGCCTCAAGCTCCACCACCACCTCCTCCACCACCCCACGGCTTACCACCTGGTGTGCCTCTTGGAAATCCTCCCAGAGCCCCTCCCCCTCCGATGCCTGGATCATTGCCGCCGCCGCCGCCACCTCCTATGTCAAATGGCCCTAGACCAGCACATTCTATTGGCAGCAGCACAACACCAAGTTTCAATATGGGCACTAGGCCTCCATCTATGCCCCCTGGGCAAGGTTTTCCGGGACAACAAATGCAGGGCCAGGGTGCTCATGCTCCACCACCACCACCACCTAGAATGGGGCAGTAG 1008 0.5238 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQYDPETNQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYETIAFKVPSTEIDKTTPKFFSHWDPDTKMFTLQLYFKPKPLEANKPQPPSTANSTAAPGVPPPPQAPPPPPPPPHGLPPGVPLGNPPRAPPPPMPGSLPPPPPPPMSNGPRPAHSIGSSTTPSFNMGTRPPSMPPGQGFPGQQMQGQGAHAPPPPPPRMGQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02239 335 MobiDBLite consensus disorder prediction 229 284 - -
Accr5g02239 335 SMART CactinC_cactus_3 89 214 - -
Accr5g02239 335 Gene3D - 93 218 - -
Accr5g02239 335 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Accr5g02239 335 FunFam Splicing factor 3a subunit 2 94 218 - -
Accr5g02239 335 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Accr5g02239 335 Gene3D Classic Zinc Finger 46 89 - -
Accr5g02239 335 Pfam Zinc-finger of C2H2 type 52 76 - -
Accr5g02239 335 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Accr5g02239 335 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Accr5g02239 335 MobiDBLite consensus disorder prediction 1 21 - -
Accr5g02239 335 MobiDBLite consensus disorder prediction 286 301 - -
Accr5g02239 335 MobiDBLite consensus disorder prediction 214 335 - -
Accr5g02239 335 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02239 1 286 C2H2 Transcription Factor Family AT2G32600 77.003 1.80e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02239 K12826 - gmx:100818114 418.698