Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02232 ATGGGATCCAGCAGAATCCTCCTTGCCTTTTTCACTTTTTCCATTTCCATCATGATTTTTTGTTATTACAGTACGCCACCTTCCCTCACCGCTATCTCTTCCATTAATCCTCAGAGTAGTTTCAGGCAACATGCGAAGATCTTAAGCAGGATTATAAAGCTGAGTGGCGCTGAAGACTTTGTGTCTCTCATAACAAGACTTGCGAGGAGGCTTCACCACCGAATGAAGCACAAGGAAAAATGTGACAAGGTCACCTGGGATTCTGATCTTATTTTGGACTACAATGTGAGCCTTGTTTTGACCGTTAGTTTAAAAGGTTGTGGAAATTTTAGCAGCATACAACAAGCAGTGAACGCGGTTCCTGAATCAAGGCCTGATAAAACCCTCATCATCGTTGATTCTGGCATATACAGAGAGAAGGTCGCGGTGGAGGAAAACAAAACAAATTTGATATTGCAAGGTCAAGGATATCTGAACACGATCATAGAATGGAATGGTACAGCCAATTCTACAGGAGGGACATTTAATAGTTATTCAGTTGGCGTCTTTGCTTCTAAGTTTATCGCCTACAACATTAGTTTTAAAAATACGGCTCCAGCACCGTCACCCGGTACGACGGGAGCACAAGCGGTGGCTCTAAGAGTGAGTGGCGACGAAGCAGCATTCTACGGCTGTGGAATGTATGGTGCTCAAGACACACTCAATGATGATAGTGGAAGACATTACTTTAAAGAATGTTTCATTCAAGGATCCATTGATTTCATATTTGGGAATGCCAAATCTCTTTATCAGGATTGTACTATAAAAACTATATCAACAGACGAAGGAACTACGGTTACTGGGGCCATCACAGCTCAAGCGAGACAGTCAGAAAAGGAAGAAACTGGGTTTTCATTTGTGAATTGTAAGATCGATGGAAGAGGAAAAGTGTGGCTTGGAAGAGCATGGGGAGCTTATGCCACGGTGGTATTTTTGAAAACATACATGTCTGATGTTGTAGCTCCTGAAGGATGGAACGATTGGTCTAATTCTACAAGAGACATGACTGTGTTTTTTGGGGAATATCATTGTTTTGGAGGTGGAGCCAACTACTCGTCCAGAGTCTCGTATGGAAAGCAGCTTAAAGACAATGAAGCTGCCCGCTTCATGAATGTTTCATATATTGATGGGAACGACTGGCTTCTCAATCATCCCAATTAA 1200 0.4233 MGSSRILLAFFTFSISIMIFCYYSTPPSLTAISSINPQSSFRQHAKILSRIIKLSGAEDFVSLITRLARRLHHRMKHKEKCDKVTWDSDLILDYNVSLVLTVSLKGCGNFSSIQQAVNAVPESRPDKTLIIVDSGIYREKVAVEENKTNLILQGQGYLNTIIEWNGTANSTGGTFNSYSVGVFASKFIAYNISFKNTAPAPSPGTTGAQAVALRVSGDEAAFYGCGMYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNAKSLYQDCTIKTISTDEGTTVTGAITAQARQSEKEETGFSFVNCKIDGRGKVWLGRAWGAYATVVFLKTYMSDVVAPEGWNDWSNSTRDMTVFFGEYHCFGGGANYSSRVSYGKQLKDNEAARFMNVSYIDGNDWLLNHPN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02232 399 FunFam Pectinesterase 94 399 - -
Accr5g02232 399 Pfam Pectinesterase 101 391 IPR000070 GO:0030599|GO:0042545
Accr5g02232 399 Gene3D - 94 397 IPR012334 -
Accr5g02232 399 SUPERFAMILY Pectin lyase-like 97 394 IPR011050 -
Accr5g02232 399 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 93 394 - -
Accr5g02232 399 ProSitePatterns Pectinesterase signature 2. 248 257 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02232 Accr-Chr5 48627481 48630131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02232 92 394 Carbohydrate Esterase AT1G05310 53.922 1.04e-118 348