Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02228 ATGCATTGCTCAGTCGGCCTCTTATCTTCCCCACTGCCACTATTCCCTCTTCAGAAAACTAGCTCGGTCACTTTAAAAGCTTATCCACTTCATCGTCTCTCCATCAAATCATCCATTGACAAAAACTCCACCACCAATTCTAACAGCAGCAGCAATAAATCCAGTTCCTGGGTTAGCCCAGATTGGCTGACCTCATTGACTAGGTCCCTTACGGTAGGAAAAGACGATTCTGGCATTCCTTCAGCAAGCGCCAAACTCGACGATGTTTCTGATCTTCTAGGTGGCGCTCTTTTTCTCCCACTGTTTAAATGGATGAATGAGTACGGCTCCATTTACCGACTCGCCGCAGGGCCTAGAAATTTTGTGGTGGTTAGTGATCCTGCTATCGCCAAGCATGTTCTCAGGAATTATGGTAAATATGCAAAGGGTCTCGTCTCCGAGGTTTCGGAGTTCCTATTTGGGTCCGGTTTTGCAATTGCTGAAGGTGCACTCTGGACGGTAAGGCGCAGGGCCGTGGTTCCATCTCTTCATAAACGTTACCTGTCTGTTATAGTTGATCGGGTATTTTGTAGATGTGCTGAGAGACTAGTGGAGAAGCTACAATATGATGCACTGAATGGAACTCCTGTTAACATGGAGGAGAAGTTTTCACAGTTGACTCTAGATGTTATCGGATTGTCTGTATTCAACTACAACTTTGATTCACTTAATTCAGATAGTCCTGTTATTGAGGCTGTTTACACTGCATTGAAGGAGGCAGAAGCTCGTTCAACTGACATTTTGCCATATTGGAAGGTTAAAGCTCTTTGCAAAATAATCCCTAGACAAATAAAAGCTGAAAAAGCCGTAAACGTCATTAGGGAAACTGTTGAAGAACTTATCCTAAAATGTAAAGAGATTGTGGAGGCTGAGGGTGAAAGAATTGATGGTAGTGATGAATATGTGAATGACACTGATCCTAGCATCCTTCGTTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTCTGCAGCTACGGGATGATCTTTTGTCACTATTAGTTGCTGGCCATGAAACCACTGGTTCAGTTTTAACCTGGACACTTTATCTGCTTAGCAAGGACTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTGCAAGGAAGACGTCCTGCCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTTCGGCTTTATCCACATCCTCCTGTCTTATTAAGAAGAGCTCAAGTTCCTGATGTACTTCCTGGAAATTATAAGGTTGATTCTGGTCAAGATATAATGATTTCTGTATATAACATCCACCATTCTTCAGAGGTTTGGGAGAGGGCTGAAGAGTTTTTGCCAGAAAGATTTGATTTGGACGGGCCAGTCCCAAATGAAACAAATACAGATTTCAGATTTATTCCGTTCAGTGGAGGACCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCAACAGTTGCTCTCGCAATCTTTCTACAACACATGAACTTTGAATTGGTTCCTGATCAGAATATTAGCATGACCACTGGAGCAACTATACATACAACAAATGGCCTGTACATGAAACTCAGCCCACGGCAAAGATAG 1629 0.4291 MHCSVGLLSSPLPLFPLQKTSSVTLKAYPLHRLSIKSSIDKNSTTNSNSSSNKSSSWVSPDWLTSLTRSLTVGKDDSGIPSASAKLDDVSDLLGGALFLPLFKWMNEYGSIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLVSEVSEFLFGSGFAIAEGALWTVRRRAVVPSLHKRYLSVIVDRVFCRCAERLVEKLQYDALNGTPVNMEEKFSQLTLDVIGLSVFNYNFDSLNSDSPVIEAVYTALKEAEARSTDILPYWKVKALCKIIPRQIKAEKAVNVIRETVEELILKCKEIVEAEGERIDGSDEYVNDTDPSILRFLLASREEVSSLQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPAYEDIKDLKFLTRCIIESLRLYPHPPVLLRRAQVPDVLPGNYKVDSGQDIMISVYNIHHSSEVWERAEEFLPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSPRQR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02228 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Accr5g02228 542 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS E-class P450 group I signature 105 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 Gene3D Cytochrome P450 80 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 SUPERFAMILY Cytochrome P450 95 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 Pfam Cytochrome P450 101 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr5g02228 542 CDD CYP97 99 534 - -
Accr5g02228 542 PANTHER CYTOCHROME P450 FAMILY 4 100 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02228 Accr-Chr5 48596120 48600628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02228 25 540 Cytochrome P450 AT3G53130 81.044 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02228 K09837 - qsa:O6P43_006591 894.419