Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02226 ATGCTGGTTCCTCCATGGCTCGAACCGCTACTGAACGCATCGTTTTTCAGCGTTTGCCGGATTCATGGAGACGCCGCCAGGAGCGAGTGTAATATGTACTGTCTGGATTGCAATGGCGACCCGTTTTGCTTTTATTGCCGTTCTTCAAGGCACAAGGATCATCAAGTTATTCAGATAAGGAGATCTTCGTATCACGATGTAGTGAGAGTTTCAGAAATCCAGAAGGTACTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCGCGAGTACTGTTCCTGAACGAGAGGCCTCAGCCAAAATCATCATCTGGGAAAGGAGGAGGAGCTCACATTTGCGAGATTTGTGGAAGAAGCCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGAAAATGCGAGGTTTGATTTGGAGGGCGCATCAGGACAAGAAGAAGTATTGCGTGAAGGGTCTCAACAAGATATGTATCCGGCCACGCCTCCTCCTCCACCGGCTGCTTCATCTGCAAGAAGAAGAAAAGGAATTCCTCATAGAGCTCCTTTTGCTTCCTAG 582 0.4674 MLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSSSGKGGGAHICEICGRSLLDPFRFCSLGCKLVGIKRNENARFDLEGASGQEEVLREGSQQDMYPATPPPPPAASSARRRKGIPHRAPFAS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02226 193 MobiDBLite consensus disorder prediction 150 193 - -
Accr5g02226 193 Gene3D Classic Zinc Finger 17 62 - -
Accr5g02226 193 SUPERFAMILY B-box zinc-binding domain 18 61 - -
Accr5g02226 193 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 191 - -
Accr5g02226 193 Pfam PLATZ transcription factor 60 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02226 Accr-Chr5 48577534 48578645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Accr5g02226 PLATZ 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02226 - - gmx:100809455 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02294 2 58196591 58197845 Accr5g02226 5 48577534 48578645 CCT