Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02214 ATGGGAGACAAGCACGAAGAGGATTGGACTGAGAGCAGCGATTTCACTTCAGAGGACGAAGGCACCGAGGACTATCGACGGGGAGGTTACCACGCTGTGCGAGTCGGCGATACCTTCAAGAATGGTCGCTATGTTGTTCAGAGCAAGCTCGGTTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCCCTGAAAGTTCAAAAGAGCGCTCAGCATTACACAGAGGCAGCGATGGACGAGATAACCATTTTACAACAGGTTGCAGATGGAGATCCAGAAGATAAAAAGTGTGTGGTGAAGCTTTTGGATCACTTCAAGCATTCAGGTCCTAATGGACAACATGTTTGTATGGTATTTGAATACCTTGGGGATAATCTTTTAACGCTTATCAAGTATACTGATTACCGAGGATTGCCAATCAACATGGTTAAAGAGATATGCTTTCACATTTTGGTTGGATTGGATTACTTACATAAGCAACTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCTTATTATCAATGATAGATCCATCTAAGGATCCTAGAAAGTCTGGTGCTCCCTTAATTCTACCAAATGCTAAAGATAAAACACCACTTGAATTGGGAATTGGGAAAGAAGTGAAAACATCAAATGGGGAACTAATGAGGATTCATAAGAAAAAGATTAAAAGGAAGGCTAAGCAGGCAGCTCAGGGGTGTGTAGAGATGAAAACTTCCGAGGAAGTTGAGGGGGATAATGAAACATCTGGTGCTGCAGAATCATCTGCAAATGCAATGCAAAATGCTGGTTCTGCAGGAGAACAACCTTCTAGTTCTACAGGGACCAATAGGTTATCAGATGATGACGGGACAAAGGTAAACTGGTCAAGAAACCAGGGTAACAAAAGAGGAAGCCGGTCATTGAGGCAGAACTTACTGAAATCAGTTGACCTCAACTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACATATAAACAGTTTACAAATGATATTCAGACAAGACAATATCGTTGTCCAGAAGTGATCCTTGGATCAAAATATTCAACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTGCTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGACCACTTGGCACTAATGATGGAGCTTCTGGGCATGATGCCACGTAAGATTGCATTAGGGGGCCGTTACTCCCGTGATTTTTTCAATAGATATGGTGACCTGAGGCACATCCGTCGTTTGCGTTTTTGGCCCTTGAACAAAGTTCTTGTGGAGAAATATGATTTCAACGAGCGAGATGCCAATGACATGGCCGACTTCTTGGTTCCTATTCTAGACTTTGTTCCTGAGAAACGGCCAACGGCCGGTCAGTGCCTTCTGCATCAGTGGATCAATGCTGGTCCCCGCCTTCTGGAGCCATCTGTACCATCTTCTAACCACAAAGCTGCAGATGCTGCTATTTCTGACCAAAAGAAAAAGGATAAGGATGATAGAGAGGCCATGGAGGCAGGTATGGGGAATATTGCCATCAATTCAGATTCTAAAGCACACATGGATTTATCAGCTAAAGCCTGTCAAAGCAGTCAGAAGTAG 1656 0.4366 MGDKHEEDWTESSDFTSEDEGTEDYRRGGYHAVRVGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILQQVADGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNAKDKTPLELGIGKEVKTSNGELMRIHKKKIKRKAKQAAQGCVEMKTSEEVEGDNETSGAAESSANAMQNAGSAGEQPSSSTGTNRLSDDDGTKVNWSRNQGNKRGSRSLRQNLLKSVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFNERDANDMADFLVPILDFVPEKRPTAGQCLLHQWINAGPRLLEPSVPSSNHKAADAAISDQKKKDKDDREAMEAGMGNIAINSDSKAHMDLSAKACQSSQK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02214 551 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02214 551 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Accr5g02214 551 MobiDBLite consensus disorder prediction 242 311 - -
Accr5g02214 551 MobiDBLite consensus disorder prediction 1 23 - -
Accr5g02214 551 MobiDBLite consensus disorder prediction 506 523 - -
Accr5g02214 551 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Accr5g02214 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Accr5g02214 551 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 14 513 - -
Accr5g02214 551 CDD STKc_SRPK 33 485 - -
Accr5g02214 551 SUPERFAMILY Protein kinase-like (PK-like) 38 497 IPR011009 -
Accr5g02214 551 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02214 551 MobiDBLite consensus disorder prediction 495 535 - -
Accr5g02214 551 MobiDBLite consensus disorder prediction 260 311 - -
Accr5g02214 551 FunFam CMGC/SRPK protein kinase 30 129 - -
Accr5g02214 551 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Accr5g02214 551 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Accr5g02214 551 Pfam Protein kinase domain 315 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02214 551 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02214 Accr-Chr5 48409233 48412986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02214 10 536 EF-hand Containing Proteins AT5G22840 67.235 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Accr5g02214 Pkinase 4.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02214 K08832 - qsa:O6P43_005863 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02214 5 48409233 48412986 Accr5g02214 5 48409233 48412986 ECH