Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02208 ATGCACACTAAGCTCTGCTCTCTTCTTCATAACATGAACAAGGCTTTTCCTTTGAACCTTGTATTGGCCTTGGCCTTCGCTTTACTCTGCTGTGTCTCAAAGTCTCTGGGCTTTACCCAAAATGACACTCACGCTCTCACTCAATTCCGCCTCCAAGCTGATACTCATGGCTATCTTCTCGTCAATTGGACCGGCGCCGACGCCTGTTCTGCTTTCTGGCGCGGCGTTCAGTGCTCCCCTAATGGCCATGTCGTCGGAATCTCGCTTCCTTCTATTAATCTCCGAGGCCCTGTTGATTCTCTGTCTTCGTTAAGCTACTTGCGCCTCCTTGACCTTCATGACAATCGATTAAACGGAAGCGTTGCGCCTCTCTCTAACTGTACCAGCCTTGAACTTCTTTATCTCTCCGGGAATGACTTCTCCGGCGAGATGCCGCCGGAGATAGCTTCCCTCACGCGTCTGCTCAGGCTTGACCTCTCTGACAACAACATCCGAGGTCCCATTCCCAAGGAACTGTCCAAATTGACTGCGCTTCTCACGCTTAGGCTACAGAACAATGATCTCTCTGGTCATATCCCTGATCTTTCTGATTCTCTGCTCAAACTCAAGGAGCTCAACATGACCAACAACGAGTTTTATGGAAGCTTACCCGACGGAATGTTGAAAAAATTCGGTGACGTAAGTTTCTCTGGGAATAAAGGTCTATGTGGATCAAACCCATTACCGGTTTGTTCCACCACAACAGAGAACTTTCCTTCTTCTTCTTCAGCATCGGCTCCAACAATTCCTTCTAAGCCAACCCCGTTACCCCAAACAAACGCAAATCCTCCTCCCAAAAGCCGACCCCGAAAGGGGTTAAGCACCGGAGTTATTGTAGCCATTGTGGTGGCGAATTGTGTGGCATTTCTGGTGATAACCTCTTTCATTGTTGCTCATTGCTGCGCCAGAGGACGAACCTCCGACTCTATGGTGGGTAGCGAAATTGGGAAGAGGAAAAGTGGGAGTAGCTATGGAAGTGAGAAAAAGGTGTACGCAAGTGGGTGTGTAGACAGCGACGGAACCACTGGAACGGACCAAAGCAGGCTTGTATTTTTCGATAGAAGGAGCCAATTCGAGCTGGAAGATTTGCTCCGAGCATCGGCGGAGATGCTGGGAAAAGGAAGCTTGGGAACAGTGTACAAGGCAGTGCTCGACGATGGATGTACTGTCGCGGTTAAGAGACTCAAAGACACAAACCCATGTGCCTGGAAAGAGTTCGAACAGTACATGGATGTGATCGGAAATCTCAAGCACCCCAATATTGTGAGACTCAGAGCTTATTACTATGCCCGAGAAGAAAAGCTCCTCGTCTATGATTATCTCCCCAACGGAAGCCTGCATTATCTTCTTCACGGGAACCGTGGTTCAGGAAGAATCCCTCTGGATTGGACTACGAGAATAAGCTTGGTTTTAGGGGCAGCCAGAGGACTCGCTCGGATTCATGCAGAATATAGTGCAGCAAAAATACCTCACGGCAACATAAAATCTTCCAACGTTGTACTCGATAAGAATGGGGTTGCTTGCATCTCTGACTTCGGCTTGTCTCTGCTATTAAACCCTGTTCATGCAATCGCAAGATTGAGTGGATACAGAGCTCCCGAACAAGAAGACAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGTGTCTTGCTGTTGGAAGTTCTCACAGGTAAGACTCCATCCCAGGAGCCTTCACCGACACGTCCTAGGTTGGTTGACGAGGAACAAACAGTGGATCTCCCCAAATGGGTGCGATCTGTAGTGAAGGAAGAATGGACGGCGGAAGTGTTTGATCAAGAATTGTTGAGGTACAAGAACATAGAGGAAGAGCTTGTTTCCATGTTGCATGTGGGCCTGTCGTGTGTGGTGGCAGAGGCAGAGAAGAGGCCATCCATGGCGGAAGTTGTTAAGATGATTGAAGAGATCAGGGTGGAGCAATCTCCTCTAGGGGAAGACTATGATGAGTCTCGCAATTCACTTTCACCTTCCCTTCCTACCACTGAAGACGGACTGGCTTAA 2067 0.4891 MHTKLCSLLHNMNKAFPLNLVLALAFALLCCVSKSLGFTQNDTHALTQFRLQADTHGYLLVNWTGADACSAFWRGVQCSPNGHVVGISLPSINLRGPVDSLSSLSYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGEMPPEIASLTRLLRLDLSDNNIRGPIPKELSKLTALLTLRLQNNDLSGHIPDLSDSLLKLKELNMTNNEFYGSLPDGMLKKFGDVSFSGNKGLCGSNPLPVCSTTTENFPSSSSASAPTIPSKPTPLPQTNANPPPKSRPRKGLSTGVIVAIVVANCVAFLVITSFIVAHCCARGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGCVDSDGTTGTDQSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDTNPCAWKEFEQYMDVIGNLKHPNIVRLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGSGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPVHAIARLSGYRAPEQEDSKKLSQQADVYSFGVLLLEVLTGKTPSQEPSPTRPRLVDEEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVAEAEKRPSMAEVVKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02208 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 660 IPR046959 -
Accr5g02208 688 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 454 667 - -
Accr5g02208 688 Gene3D Phosphorylase Kinase; domain 1 350 453 - -
Accr5g02208 688 FunFam pollen receptor-like kinase 1 349 453 - -
Accr5g02208 688 ProSiteProfiles Protein kinase domain profile. 378 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02208 688 FunFam Nuclear pore complex protein NUP107 39 194 - -
Accr5g02208 688 CDD STKc_IRAK 384 658 - -
Accr5g02208 688 MobiDBLite consensus disorder prediction 247 283 - -
Accr5g02208 688 Gene3D Transferase(Phosphotransferase) domain 1 454 675 - -
Accr5g02208 688 Pfam Protein kinase domain 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02208 688 MobiDBLite consensus disorder prediction 247 262 - -
Accr5g02208 688 Gene3D Ribonuclease Inhibitor 98 248 IPR032675 -
Accr5g02208 688 Gene3D Ribonuclease Inhibitor 35 97 IPR032675 -
Accr5g02208 688 SUPERFAMILY L domain-like 41 238 - -
Accr5g02208 688 SUPERFAMILY Protein kinase-like (PK-like) 382 656 IPR011009 -
Accr5g02208 688 MobiDBLite consensus disorder prediction 663 688 - -
Accr5g02208 688 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02208 Accr-Chr5 48336082 48338395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02208 35 684 Receptor kinase-like Gene Family AT2G36570 65.970 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr5g02208 Pkinase 6.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02208 - - qsa:O6P43_009504 1010.36