Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02203 ATGGAAGAAAAAGTTGTCAATGTTTTCGGGTCACCCGGAAGCTCAGACGCCGGGCAGCCTCTGCAACCCGTCGGAGTTTCCGTGCCTCAAGTAACGAACATGACGGTGAATATGAACTTGCAGAATAGTGGAGGCGCAACAGTCGGAGATGCAGCTACAATGACATCGCCTGCAAGTACTGGAGGAGGAGGACCAGGGAGTTTTGATTTGTTTGGAAAAAAGAAGAGAGGGAGGCCGAGAAAATATGATTCCGATGGGAAGCCGAGGGTGACGACGTCGTTTCAGGGTGCACCATCACAACAAGGCTTTTCTTTGTCCCCAACCTCACCTTCTGAATTCTCCTCCAAAAGGGGTCGAGGAAGACCACCTGGCTCCGGCAACTGGAAGCTCCTCGCATCTTTAGGTGAGTTGTTTGCAAACACAGCAGGTGGGGATTTCACACCTCATGTCGTCACTGTTCATACTGGAGAGGATGTTGCCGGAAAAATCCTGTCATTTGCCCAGAAAGGTACTAGAGGAGTTTGCGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCTGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATTTTGTCTCTGTCAGGGTCATTCACTGTTTCTGATAATGGGGGTCTAAAAAGTCGAACTGGTGGATTGAGTGTCTCTCTGGCTGGCCCTGATGGTCGTGTGATAGGTGGTGGTGTTGCTGGTCTCTTGACTGCTGCCAGCCCAATCCAAATTGTGATGGGAAGCTTTATGCCGTTTAGTCCGAAGGCACAGAAAAGAAAGCTACAGCGTGAGAAGACAGTGGCACCAGTTTCTGGTGCAGATGCTGTGATGGCGGCAAGACCTATCTCACTGGCGAATCCTGGTGGTGGTACTGGTGACAACTATTTCACACCCATGGCCCAGCAGCAGCAGCTTCCAGAACAAAGCCACAGAGAATCAGACAACATTACAGGCAGTGGTAAACAGAGTTTAGCTGCCACACCCAATACTTCTGATTGGAATGGATTTGAAGAGTTATCTGATCAGGGCCCAACCCCAGACATCAATATATCTTTGCCTGGGGAATAG 1104 0.4973 MEEKVVNVFGSPGSSDAGQPLQPVGVSVPQVTNMTVNMNLQNSGGATVGDAATMTSPASTGGGGPGSFDLFGKKKRGRPRKYDSDGKPRVTTSFQGAPSQQGFSLSPTSPSEFSSKRGRGRPPGSGNWKLLASLGELFANTAGGDFTPHVVTVHTGEDVAGKILSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSFTVSDNGGLKSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPFSPKAQKRKLQREKTVAPVSGADAVMAARPISLANPGGGTGDNYFTPMAQQQQLPEQSHRESDNITGSGKQSLAATPNTSDWNGFEELSDQGPTPDINISLPGE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02203 367 MobiDBLite consensus disorder prediction 299 367 - -
Accr5g02203 367 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 324 IPR039605 GO:0003680
Accr5g02203 367 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Accr5g02203 367 ProSiteProfiles PPC domain profile profile. 143 286 IPR005175 -
Accr5g02203 367 MobiDBLite consensus disorder prediction 307 350 - -
Accr5g02203 367 Pfam AT hook motif 116 125 IPR017956 GO:0003677
Accr5g02203 367 Pfam AT hook motif 73 84 IPR017956 GO:0003677
Accr5g02203 367 MobiDBLite consensus disorder prediction 71 87 - -
Accr5g02203 367 CDD DUF296 147 261 IPR005175 -
Accr5g02203 367 Gene3D - 148 279 - -
Accr5g02203 367 MobiDBLite consensus disorder prediction 88 115 - -
Accr5g02203 367 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Accr5g02203 367 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Accr5g02203 367 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 267 - -
Accr5g02203 367 MobiDBLite consensus disorder prediction 1 25 - -
Accr5g02203 367 MobiDBLite consensus disorder prediction 42 126 - -
Accr5g02203 367 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02203 Accr-Chr5 48276761 48279342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02203 73 262 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.214 1.17e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02203 - - qsa:O6P43_009509 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02203 5 48276761 48279342 Accr5g02203 5 48276761 48279342 ECH