Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02197 ATGGAAATGCAGGAGGATCATCATCACCGTCATCAACAACAGCATCAGCAACATCTTGACTATGCAACCATTGGGGATCTCCGCCACCTCATGACTGCACCCAGGCCCCTCTCCGCAGACCTCTTCCCGGCTCACCCCGCCGGCGCCCACCACTACGACGCCTTGTCCTTCCCTCTTCATCAACTGATGCCTGATATCATGCCTCCTGCTCTTCACGATTCTTCTCCTCTTAATACTAGCATTTCTGTGGCCACTCCCTCCGCCGCTGCCGCCACTACTCCCTCGCTTAGTGCCTTTGAGGCTGACACTTCCGGTTCTTTCCCCGGAGACGCCTCCTCCGCACGATGGCCCAGACAGGAAACTCTTACACTTCTTGAGATCAGATCTCGTCTCGACTCTAGGTTCAGACACGCCAATCAAAAGGGCCCCTTATGGGATGAGCTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAAAACCTGTATAAATATTACAAGAAAACAAAAGAAGGTAAGGCAGGAAGACAGGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACACCAACCCAATAACCTCAGCCCAAGAAACCAATTTCGGTAGCAACAACAGTAGCCTTCACTTTCACACACCCTCCCAAACAAACCAAGACATTTTTAATAGGCACTATGATAGCGTTAGCCTCACTAATAATAACTCCACTGATGAGCTGGACACGTCATCATCTGATGAAAATGATTCGACGGAGAAGATGAGGAGAAAGAGAAGAGGAAGAAGAAGCTGGAAAGTAAAGATAAAAGAGCTGATAGACTCAGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAAGAGAAGGAAAAGGAGAGGGCTTTGAGAGAGGAAGAATGGAGTAAACAAGAGGCAGAAAGGTTAGATAGGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGAGGCGCTGCAGAAATTAACAGGAAGACAAATAATAAAGGCTGGTGGTGATCCACCAAATGCTGATATTCAAAATTACAGTGAAAATCAGAATGAAGATGGAAGTGAAATACTACATAGCACTGACAGAGTTGGTGAAAGTTGGACAGAATGTGAGATCAGTAATATGGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGCGGAGGTTCTGTGGGAGGAAGTTGCTAACAAAATGGCTTGTTTTGGTTACCATAAGGCTGCTTCCGTGTGCAAAGACAAGTGGGAAAGTATCAGAAGTAGATATCATCATCACAAGAAGTGCAACAAGCAAAATTCATCAGCTACATTTTACTTGGATACCAATAATAATAATCATAATCAGTCACCCCTATACAATCATCAAGGAAGCAGTGTTTATTGTGATGTCAACCAACAGCGGCAGGATGGTTCTTCACCTTCAAATTCTAACGTTGGCAATAGTGCTGCTAGGCCTGATGGTTGTTTTCCCTTGTTCATGTGTGAAGGAGAAAATATGTGGGAAAATTTTGGCTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1662 0.4513 MEMQEDHHHRHQQQHQQHLDYATIGDLRHLMTAPRPLSADLFPAHPAGAHHYDALSFPLHQLMPDIMPPALHDSSPLNTSISVATPSAAAATTPSLSAFEADTSGSFPGDASSARWPRQETLTLLEIRSRLDSRFRHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENTNPITSAQETNFGSNNSSLHFHTPSQTNQDIFNRHYDSVSLTNNNSTDELDTSSSDENDSTEKMRRKRRGRRSWKVKIKELIDSEMKKVMEKQEAWLERLMKTLEEKEKERALREEEWSKQEAERLDREHKFWAKERAWIEARDAALMEALQKLTGRQIIKAGGDPPNADIQNYSENQNEDGSEILHSTDRVGESWTECEISNMVQMRAEVESRFGQSGCPAEVLWEEVANKMACFGYHKAASVCKDKWESIRSRYHHHKKCNKQNSSATFYLDTNNNNHNQSPLYNHQGSSVYCDVNQQRQDGSSPSNSNVGNSAARPDGCFPLFMCEGENMWENFGLKFNKGNQNP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02197 553 FunFam trihelix transcription factor PTL-like 116 178 - -
Accr5g02197 553 Coils Coil 292 334 - -
Accr5g02197 553 ProSiteProfiles Myb-like domain profile. 108 173 IPR001005 -
Accr5g02197 553 MobiDBLite consensus disorder prediction 247 275 - -
Accr5g02197 553 FunFam Trihelix transcription factor GT-2 401 464 - -
Accr5g02197 553 Gene3D - 116 178 - -
Accr5g02197 553 Gene3D - 401 463 - -
Accr5g02197 553 ProSiteProfiles Myb-like domain profile. 393 458 IPR001005 -
Accr5g02197 553 CDD GT1 401 461 - -
Accr5g02197 553 PANTHER FI21293P1 91 504 - -
Accr5g02197 553 Pfam Myb/SANT-like DNA-binding domain 114 201 IPR044822 -
Accr5g02197 553 Pfam Myb/SANT-like DNA-binding domain 400 477 IPR044822 -
Accr5g02197 553 CDD GT1 115 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02197 Accr-Chr5 48191732 48194240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02197 115 548 Trihelix Transcription Factor Family AT5G03680 49.061 1.02e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr5g02197 Myb_DNA-bind_4 2.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02197 - - pcin:129306756 812.372