Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02196 183 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Accr5g02196 183 MobiDBLite consensus disorder prediction 1 31 - -
Accr5g02196 183 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Accr5g02196 183 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Accr5g02196 183 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Accr5g02196 183 MobiDBLite consensus disorder prediction 1 16 - -
Accr5g02196 183 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Accr5g02196 183 Pfam AP2 domain 17 67 IPR001471 GO:0003700|GO:0006355
Accr5g02196 183 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Accr5g02196 183 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Accr5g02196 183 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 12 180 IPR045277 GO:0003700
Accr5g02196 183 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02196 Accr-Chr5 48170872 48171423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02196 6 181 AP2-EREBP Transcription Factor Family AT2G36450 56.684 7.59e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Accr5g02196 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02196 - - gmx:100799620 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02340 2 58690993 58691595 Accr5g02196 5 48170872 48171423 CCT
Accr5g02196 5 48170872 48171423 Accr5g02196 5 48170872 48171423 ECH