Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02190 ATGGACTTGTATCTGAAACAATGGAGAAACCAGGATGAGTCAGTGGCAGAGGAACAACATTCTGCAAAGATGCCAAAACTTGTTCTCGAATCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCCAACCCAACCCTAAAGTCAGCACCTTGTCAGCATCCTCTGATTCTACCTCAGCTTCTACCAGTGTTCCCCGGATGGGGAGTTATTTCAGCTTCTCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCCGGCGCTGCTGTGCCTTCTGAGCTTCTTCACCCAATCAAGAAAAGCCTTCTTCAATCTTCTTCCTATTTCCTTCAACACTATCCACACTATGACCCTGCTTTAGCATTGCAATCAGGGTATTGGGGAAGGGTAGCCATGGATCCAGAGCCTGGCCGGTGTCGGAGGACTGATGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTTCCGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACTAAACGCTGCCGGTGGCGGTGGCTCTGGCAGTGGCGGAGGTTCTGTCGGTGCTCCAATATCCATGACTGCGCCGTCTTTGGCATCGGCTTCACTGAGTTCCCGTTTGGATTTCCATCTTGATCAAAGTTTCTTTGGGACCAATAATGAAAACAAGAGCCAGTTTGGAATCCAAGGTGGGGTTAGTGGGGATGGCAAATCTGGTGGTCATATCCTGCGATGTCATTTTAATGATTGGCCAACATCACTTGAAAAATCTGACATTGCCGAAAGCAGTGTTAGTAGCTCCTTCGACTCGATGACATGTCTGTATTCTTCGTCGGATGTGTCTTTGAAGTTATCCACTGGGTAG 918 0.4946 MDLYLKQWRNQDESVAEEQHSAKMPKLVLESHQKPQSSASALPLFVPQPNPKVSTLSASSDSTSASTSVPRMGSYFSFSQWQELELQALIFRYMLAGAAVPSELLHPIKKSLLQSSSYFLQHYPHYDPALALQSGYWGRVAMDPEPGRCRRTDGKKWRCSRDVVSGQKYCERHMHRGRNRSRKPVELPTLNAAGGGGSGSGGGSVGAPISMTAPSLASASLSSRLDFHLDQSFFGTNNENKSQFGIQGGVSGDGKSGGHILRCHFNDWPTSLEKSDIAESSVSSSFDSMTCLYSSSDVSLKLSTG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02190 305 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Accr5g02190 305 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02190 305 MobiDBLite consensus disorder prediction 174 204 - -
Accr5g02190 305 Pfam WRC 144 186 IPR014977 -
Accr5g02190 305 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02190 305 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02190 305 PANTHER GROWTH-REGULATING FACTOR 5 53 283 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr5g02190 305 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02190 Accr-Chr5 48095693 48097622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02190 1 305 GRF Transcription Factor Family AT3G52910 47.077 4.19e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr5g02190 WRC 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02190 - - pcin:129307222 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02344 2 58753754 58755675 Accr5g02190 5 48095693 48097622 CCT
Accr5g02190 5 48095693 48097622 Accr5g02190 5 48095693 48097622 ECH