Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02189 ATGGACTTGTATCTGAAACAATGGAGAAACCAGGATGAGTCAGTGGCAGAGGAACAACATTCTGCAAAGATGCCAAAACTTGTTCTCGAATCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCCAACCCAACCCTAAAGTCAGCACCTTGTCAGCATCCTCTGATTCTACCTCAGCTTCTACCAGTGTTCCCCGGATGGGGAGTTATTTCAGCTTCTCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCCGGCGCTGCTGTGCCTTCTGAGCTTCTTCACCCAATCAAGAAAAGCCTTCTTCAATCTTCTTCCTATTTCCTTCAACACTATCCACACTATGACCCTGCTTCATTGCAATCAGGGTATTGGGGAAGGGTAGCCATGGATCCAGAGCCTGGCCGGTGTCGGAGGACTGATGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTTCCGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACTAAACGCTGCCGGTGGCGGTGGCTCTGGCAGTGGCGGAGGTTCTGTCGGTGCTCCAATATCCATGACTGCGCCGTCTTTGGCATCGGCTTCACTGAGTTCCCGTTTGGATTTCCATCTTGATCAAAGTTTCTTTGGGACCAATAATGAAAACAAGAGCCAGTTTGGAATCCAAGGTGGGGTTAGTGGGGATGGCAAATCTGGTGGTCATATCCTGCGATGTCATTTTAATGATTGGCCAACATCACTTGAAAAATCTGACATTGCCGAAAGCAGTGTTAGTAGCTCCTTCGACTCGATGACATGTCTGTATTCTTCGTCGGATGTGTCTTTGAAGTTATCCACTGGGTAG 915 0.4951 MDLYLKQWRNQDESVAEEQHSAKMPKLVLESHQKPQSSASALPLFVPQPNPKVSTLSASSDSTSASTSVPRMGSYFSFSQWQELELQALIFRYMLAGAAVPSELLHPIKKSLLQSSSYFLQHYPHYDPASLQSGYWGRVAMDPEPGRCRRTDGKKWRCSRDVVSGQKYCERHMHRGRNRSRKPVELPTLNAAGGGGSGSGGGSVGAPISMTAPSLASASLSSRLDFHLDQSFFGTNNENKSQFGIQGGVSGDGKSGGHILRCHFNDWPTSLEKSDIAESSVSSSFDSMTCLYSSSDVSLKLSTG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02189 304 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02189 304 PANTHER GROWTH-REGULATING FACTOR 5 53 282 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr5g02189 304 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02189 304 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Accr5g02189 304 Pfam WRC 143 185 IPR014977 -
Accr5g02189 304 MobiDBLite consensus disorder prediction 173 203 - -
Accr5g02189 304 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr5g02189 304 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02189 Accr-Chr5 48095693 48097622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02189 1 304 GRF Transcription Factor Family AT3G52910 47.222 2.81e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr5g02189 WRC 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02189 - - jre:108983419 355.91