Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02178 ATGGCTTCACTTCATCGTGTACTGTCCCTTCTTCCTCTTGTGCTACTCATAATCCTCTCTGCACACTTGGGATTGGAAGCAGAAGCTCGTAAGATGCATAATCCGACAAAATTGTTCGTCTTTGGGGACTCCTATGCAGATACCGGCAACGTTAGGAGAGATGTGGGCAATTCCTGGAAACAGCCATACGGAATTACCTTTCCCGGAAAACCCTCCGGCCGTTTCTCCGACGGCAGAGTCCTCACTGATTTTCTCGCCAAGTATTTGGGAGTGAGATCGCCGGTGCCTTACAGAATGAGAAATTGGATACCACGATATATGAAATACGGCATGAACTTTGCATATGGTGGCACTGGGGTTTTCGATACCTCCGCTCCATACCCAAATATGACTGTCCAGATCGATTTCTTCCAACGCCTCATCAGAGAAAAAGTGTACAACTACGCTGACCTCCGCAACTCCGTCGCCTTCGTCTCCGTCGCCGGCAACGACTACAGTTTTTATCTCTCCACAAATGGCTCCGTTGAGGGGGCGCCGGCGTTTGTTGCGTCGGTGGTGAACCAGACACTTAAAAATGTAGCTAGAATCCATGGATTGGGAGTGAAGAAAATTGCAGTGAGTGGTGCTCAACCACTAGGGTGCCTGCCGCAGCTGACAGCATCGTCGTCATTTTCACGGTGCAACTCCACCTCCAACACCTTCGCTACTCTGCACAACACGCTCTTAAACCAGGGTCTGGCCAAATTGAAGGAAGAAGCCAACGACAATTCAAGCATTGTCCTTGTAGACCTCTACGACAGTTTCATGTCGGTACTGAACCACCCCTCCACCCATAACATACGGAACCAGCTCAGGCCTTGTTGCTTTGGGGTGAGCAGCCAGTACTCTTGTGGAAGCGTGGACCCTGAGACCATGGCCAAGAAATACACATTGTGTGACGATCCTAAGTCGGCTTTTTTCTGGGATTCGGTTCACCCAACGCAAGCTGGATGGCGTGCCGTTTACAATAACTTGCTCGCCACCCATGCTCTTCAACAACTTCAACACTAG 1050 0.501 MASLHRVLSLLPLVLLIILSAHLGLEAEARKMHNPTKLFVFGDSYADTGNVRRDVGNSWKQPYGITFPGKPSGRFSDGRVLTDFLAKYLGVRSPVPYRMRNWIPRYMKYGMNFAYGGTGVFDTSAPYPNMTVQIDFFQRLIREKVYNYADLRNSVAFVSVAGNDYSFYLSTNGSVEGAPAFVASVVNQTLKNVARIHGLGVKKIAVSGAQPLGCLPQLTASSSFSRCNSTSNTFATLHNTLLNQGLAKLKEEANDNSSIVLVDLYDSFMSVLNHPSTHNIRNQLRPCCFGVSSQYSCGSVDPETMAKKYTLCDDPKSAFFWDSVHPTQAGWRAVYNNLLATHALQQLQH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02178 349 CDD SGNH_plant_lipase_like 38 339 IPR035669 -
Accr5g02178 349 Gene3D SGNH hydrolase 26 346 IPR036514 -
Accr5g02178 349 SUPERFAMILY SGNH hydrolase 34 339 - -
Accr5g02178 349 PANTHER OSJNBB0059K02.9 PROTEIN 15 346 - -
Accr5g02178 349 Pfam GDSL-like Lipase/Acylhydrolase 38 336 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02178 Accr-Chr5 48006196 48008912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02178 25 334 Pollen Coat Proteome AT1G75930 27.035 5.96e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02178 - - gmx:100818373 455.292