Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02174 ATGGCGGAAGAGCACCGATGCCAGGCTCCCGAAAGTCACCGACTCTGTGCTAATAACTGCGGCTTCTTCGGCAGCCCGGCCACCATGAATCTCTGCTCCAAGTGCTACAGGGATTTCTGTTTGAAGGAGCAACAGGAAGCCTCCACCAAATCCACAATCGAAACCGCCCTCTCCTCCCCTGCTTTGCCGTCCTCAGGGTCACCTGTTTTGCCGGCCGTGGAGTCCCCCGCTGCTCCGCCGATGATAACATTGCCTGAAGTTGCGGCAGATGCGTCGATCTCGGCTGTTACATCCTCTGGGCCGGAAGCGGCGACCGCGCAACCTAACCGATGCGGTTCGTGCCGGAAACGGGTCGGGCTGACCGGGTTCAAGTGCAAGTGCGGGGCTACGTTTTGTGGGACCCACAGGTATCCCGAGAAACACGGGTGTAGCTTCGACTTCAAGAAGGTGGGCCGAGAGGAAATAGCTCGGGCAAACCCTCTGATCAAGGGGAAGAAGCTGGAAAGGATTTAA 513 0.5809 MAEEHRCQAPESHRLCANNCGFFGSPATMNLCSKCYRDFCLKEQQEASTKSTIETALSSPALPSSGSPVLPAVESPAAPPMITLPEVAADASISAVTSSGPEAATAQPNRCGSCRKRVGLTGFKCKCGATFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKGKKLERI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02174 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 170 - -
Accr5g02174 170 SMART AN1_Zf_4 111 148 IPR000058 GO:0008270
Accr5g02174 170 Gene3D - 1 61 - -
Accr5g02174 170 ProSiteProfiles Zinc finger AN1-type profile. 105 151 IPR000058 GO:0008270
Accr5g02174 170 MobiDBLite consensus disorder prediction 51 76 - -
Accr5g02174 170 Gene3D - 88 166 IPR035896 -
Accr5g02174 170 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Accr5g02174 170 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Accr5g02174 170 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Accr5g02174 170 FunFam Zinc finger AN1-type containing 6 86 166 - -
Accr5g02174 170 MobiDBLite consensus disorder prediction 51 65 - -
Accr5g02174 170 Pfam AN1-like Zinc finger 111 147 IPR000058 GO:0008270
Accr5g02174 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 56 - -
Accr5g02174 170 SUPERFAMILY AN1-like Zinc finger 100 164 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02174 Accr-Chr5 47957239 47957751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02174 1 170 C2H2 Transcription Factor Family AT3G52800 56.977 2.15e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02174 - - fve:101297749 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02359 2 58939845 58940345 Accr5g02174 5 47957239 47957751 CCT