Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02163 ATGGGGGTGGGGGAAGGTGAGACGACGAACTCGCAGGGCGAGGTGGAATCTGGGCACAAGAATAATCACCAATTCTCATCGCTAGGAAGACAATCGTCGATTTATTCGCTCACGCTCGACGAGTTTCAGCACACGCTATGCGAGAGTGGCAAGAATTTTGGGTCCATGAACATGGACGAGTTTCTAAGCAGTATCTGGAACGCCGAGGAGAGCCAAGCTATTAACTCTAACCATAATTTTAACGCCCACGACAACAACACAGGCTTGCCTCTGAATGAAGCAGCCGCTGACAAAGAAATGATTCGCAAGCAGCCAAGCCTTCCTCGTCAGGGCTCTCTGACGTTGCCGGCGCCGCTCTGTAGGAAGACGGTGGATGAAGTTTGGTCTGAGATACACAGAGGACAGCAGGGTCATCCGAGCAACAGCGCTGGCGCCAATGGCAATGTGCAGGATACCGAATCTGCCCCTCGCCAGCCTACATTTGGGGAAATGACTCTTGAGGATTTCTTGATCAAAGCAGGGGTGGTTCGGGAATCCTGTACTGCTCCGATACCCGCCCAAGCTTCGACGCGGCAGCAGCAGCAGCAGCCGCCCCCGCCGTATGGGATGTACCCGAATAACAACTCGACAATGGGGCCCTCTTTTGTTGGTAGGCCCGTATTGGCCGGCAATGTGGTTCCTCCGTACCAGGCGGTGGCTCAGGGAGAGCCTTCTTCCGGGTACGTCGGGAATGGGAAGAGGGATAGTGGGTATCCTCCGCCGCCACCGCCGGCGTCGGGGGCTTGCTACGGTGGGAGGGTGCTGAATGGAAGCGGTGGGTATGGGGCACCGGCGCCGACTATGGGAATAGGGGCGCCGTTGAGCCCGGTTTCGCCGGATGGGCTGGGAACAAATGAGAACTGTGGTGGTCAGTTTGGGTTAGAGATGGGGATGTTGAGAGGAAGGAAGAGGATCATCGATGGTCCGGTGGAGAAGGTGGTGGAAAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCGGCGGCGAGATCCAGAGCCAGAAAACAGGCATACACGGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAACGCCCATCTGAAACTGGCGCTGGCCGAGCTTGAGAGGAGAAGAAAGCAACAGAATCTTGAGGAAGCAAAAGTTCCTACCAAAGCTCAGAAGGCAAGAGAGAAATTGAGGTCTTTGATAAGGACTGTGAGCTGTCCTTTGTGA 1239 0.5464 MGVGEGETTNSQGEVESGHKNNHQFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEESQAINSNHNFNAHDNNTGLPLNEAAADKEMIRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHRGQQGHPSNSAGANGNVQDTESAPRQPTFGEMTLEDFLIKAGVVRESCTAPIPAQASTRQQQQQPPPPYGMYPNNNSTMGPSFVGRPVLAGNVVPPYQAVAQGEPSSGYVGNGKRDSGYPPPPPPASGACYGGRVLNGSGGYGAPAPTMGIGAPLSPVSPDGLGTNENCGGQFGLEMGMLRGRKRIIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAHLKLALAELERRRKQQNLEEAKVPTKAQKAREKLRSLIRTVSCPL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02163 412 Pfam bZIP transcription factor 329 381 IPR004827 GO:0003700|GO:0006355
Accr5g02163 412 Coils Coil 345 386 - -
Accr5g02163 412 SUPERFAMILY Leucine zipper domain 329 379 IPR046347 GO:0003700|GO:0006355
Accr5g02163 412 CDD bZIP_plant_BZIP46 329 383 - -
Accr5g02163 412 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 327 383 - -
Accr5g02163 412 MobiDBLite consensus disorder prediction 236 264 - -
Accr5g02163 412 MobiDBLite consensus disorder prediction 1 26 - -
Accr5g02163 412 MobiDBLite consensus disorder prediction 134 159 - -
Accr5g02163 412 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 410 IPR043452 GO:0003700|GO:0045893
Accr5g02163 412 MobiDBLite consensus disorder prediction 184 203 - -
Accr5g02163 412 MobiDBLite consensus disorder prediction 132 159 - -
Accr5g02163 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 327 379 IPR004827 GO:0003700|GO:0006355
Accr5g02163 412 SMART brlzneu 325 389 IPR004827 GO:0003700|GO:0006355
Accr5g02163 412 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 332 347 IPR004827 GO:0003700|GO:0006355
Accr5g02163 412 Gene3D - 327 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02163 Accr-Chr5 47866393 47868259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02163 22 383 bZIP Transcription Factor Family AT2G36270 54.237 4.97e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr5g02163 bZIP_1 1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02163 K14432 - gmx:106794959 501.901