Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02112 ATGGGTAAGAAAATGAAGCTCCTTCCCTCTATTCTCAAAACCTTAGAATCAACAAGGTCGTCTTCTTCTTCCTCGTCCTCCTCCTGGTCTTGGCCTTCCTGTCACCATCCTAGAACCCTCTCTTTCCGAACTTCATCCTCCGACATCTTCAGAACCATCAACTCTGCTTACCTCGACCTCCCCGACGACGACGCATCTGATCCAATCGAGACCATGATTCGCGGCGGCTTGAGATCATCGGATCGTCTCTTCTTCGAGCCAGACCAAACCAGCTCCATATTAGAGGCTAAATCAGCGACGACAACCTTGACATTCAAAGACACCCTCGTACTGTCCATGGAATCCCAGGATCCGTTCGTGGATTTTCGCAAATCAATGGAAGAGATGGTGGAAGCTCACGGCGTTAAGGACTGGGACAGTCTTGAAGAGCTCTTGTGTTGGTATCTGAGGGTCAACGCTAAGAGTAATCACGGCTATATTATGGGTGCTTTCGTTGATTTATTGCTTGTTCTTTCTTTGTCTTCCGAATCTTCTTCACTTTCTTCTGCTTCTTCTTCTCTCTCTTTGTATACTTCTTCTTCTCCCTCTTCTTCTTTTACCACTCCTTGTGCCTCGTGTTTGGAAGCAGATGAAGATGTTCATGTGAAGCAGGAGATTAAACGTGAAGATGAGGAGGCCTCCTCATCGTCTTCAACTGTTTGA 702 0.4672 MGKKMKLLPSILKTLESTRSSSSSSSSSWSWPSCHHPRTLSFRTSSSDIFRTINSAYLDLPDDDASDPIETMIRGGLRSSDRLFFEPDQTSSILEAKSATTTLTFKDTLVLSMESQDPFVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNAKSNHGYIMGAFVDLLLVLSLSSESSSLSSASSSLSLYTSSSPSSSFTTPCASCLEADEDVHVKQEIKREDEEASSSSSTV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02112 233 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 28 171 IPR038933 GO:0045892
Accr5g02112 233 NCBIfam uncharacterized plant-specific domain TIGR01568 111 172 IPR006458 -
Accr5g02112 233 Pfam Transcriptional repressor, ovate 115 171 IPR006458 -
Accr5g02112 233 ProSiteProfiles OVATE domain profile. 111 170 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02112 Accr-Chr5 47471402 47472103 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr5g02112 Ovate 2.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02112 - - tcc:18598361 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02426 2 59639855 59640526 Accr5g02112 5 47471402 47472103 CCT
Accr5g02112 5 47471402 47472103 Accr2g00213 2 5922520 5923215 ECH
Accr5g02112 5 47471402 47472103 Accr5g02112 5 47471402 47472103 ECH