Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02101 ATGGCCGATAAAAATCCCCAATTGAACGGTGCCTACTACGGCCCCTCCATCCCACCACCCCCCAAATCCTACCACCGCCCAGGCCGTGGCGGCAGCGGCTGCGGCTGTTGCTTATTTGACTGCTGCTGTGGCTGTATCTTCAGCCTTATCTGTAAACTCGTCTGCACCATAATCGTCATCGTCGGGATCGCCGTTCTTGTGTTCTGGCTCATTGTCCGACCAAGCAAGGTCAAATTCCACGTCACCGATGCCTCCCTCACGGAGTTCAACTACACCAACGACGGCATGCTCCACTACAATCTTGCCCTCAACATGACCATCCGCAACCCCAACAGAAGGCTTGGCATTTACTACGACAACGTCGAAGCAAGAGCTCTATACCAGGATGCCAGGTTCGCTTCCAACGAAATCTCGCCTTTCTATATGGGCCACAAGACCACTCATTATTTGAGCACCGAGTTCAAAGGTCAAAACTTGATTTCCCTGGGCGCCGATCAGACTTCAGAATACAATAAGCAAAAGAGCTCCGGGGTTTATGACATCGATGTGAAGCTGTATCTCAAGATTCGGTTCAAGTTGGGCGTGTTCAAGACCGGAAAGTTCAAGCCCAAGATTCATTGTGACCTCAAGGTTCCCTTGACGGCCAATGGCAACCCGTCGTCCGGCACGTTCGAGAGCACCGAGTGCGAGTTGGACTACTGA 702 0.5228 MADKNPQLNGAYYGPSIPPPPKSYHRPGRGGSGCGCCLFDCCCGCIFSLICKLVCTIIVIVGIAVLVFWLIVRPSKVKFHVTDASLTEFNYTNDGMLHYNLALNMTIRNPNRRLGIYYDNVEARALYQDARFASNEISPFYMGHKTTHYLSTEFKGQNLISLGADQTSEYNKQKSSGVYDIDVKLYLKIRFKLGVFKTGKFKPKIHCDLKVPLTANGNPSSGTFESTECELDY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02101 233 PANTHER OS05G0367900 PROTEIN 41 216 IPR044839 GO:0098542
Accr5g02101 233 Pfam Late embryogenesis abundant protein 105 208 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02101 Accr-Chr5 47349190 47349891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02101 71 222 SNARE and Associated Proteins AT1G32270 37.500 1.13e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02101 - - qsa:O6P43_006020 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02101 5 47349190 47349891 Accr5g02101 5 47349190 47349891 ECH