Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02043 ATGGGTGTGAATTCCCTGCCATCGGAGTCGAGCAACGATCTCGATGAGCAGATCTCGCAGCTAATGCAGTGCAAGCCACTTTCTGAGCAACAGGTTAGAGTTTTATGCGAGAAAGCAAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGTCCTGTGACAATCTGTGGAGATATTCATGGTCAGTTTCATGATCTAGCTGAGCTATTTCGAATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTTATGGGAGATTATGTGGACCGAGGTTATTATTCAGTTGAAACTGTAACACTCCTTGTGGCTTTGAAAGTGCGGTATCCTCAACGGATTACTATTCTTCGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTTTATGGATTTTATGATGAATGCCTGAGAAAATATGGTAATGCCAATGTTTGGAAGATCTTTACAGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAATCAGAAATATTTTGTTTGCATGGGGGACTGTCGCCATCAATTGAAACCCTCGACAATATAAGGAACTTTGATCGAGTTCAAGAGGTTCCTCATGAAGGGCCAATGTGTGATTTGTTATGGTCTGACCCTGATGACAGATGTGGCTGGGGGATTTCTCCTCGTGGTGCTGGATATACCTTTGGCCAGGATATATCTGAGCAATTCAATCACACAAACAGTCTTAAGTTGATTGCTCGAGCTCACCAGCTAGTGATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTTACCATATTTAGTGCACCTAACTACTGTTATAGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTGCAAGAGTCACACATTTATCCAGGTAGTACTGTAG 888 0.42 MGVNSLPSESSNDLDEQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKSHTFIQVVL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Accr5g02043 295 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Accr5g02043 295 Gene3D - 7 294 IPR029052 -
Accr5g02043 295 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Accr5g02043 295 SMART pp2a_7 27 295 IPR006186 GO:0016787
Accr5g02043 295 SUPERFAMILY Metallo-dependent phosphatases 10 293 IPR029052 -
Accr5g02043 295 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 12 292 IPR047129 GO:0004722
Accr5g02043 295 FunFam Serine/threonine-protein phosphatase 7 294 - -
Accr5g02043 295 Pfam Calcineurin-like phosphoesterase 55 246 IPR004843 GO:0016787
Accr5g02043 295 CDD MPP_PP2A_PP4_PP6 13 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02043 Accr-Chr5 46754746 46760962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02043 19 243 Calmodulin-binding Proteins AT5G63870 34.457 7.56e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02043 K04382 - qsa:O6P43_005794 599.742