Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02033 ATGGACAAAGCTTCAGAGACTAGTAGTAGAGAGACACATGACTTCATGAACGTCGATTCTTTCTCTCAGCTTCCCTTCATCCGCCCTTCCCCTCTTACTAAAGAAAAGCCCATCAAGCTCTTCGGCATTGAATTCGCTTCCCCCGAAGCCACCGCCACCGCCACCGTGCAGCCTGCAGACGATTCCGAATCTGCCGAAGACTCAAGCGGTGGGAAGGACAACAGCAGCGAGACTAACCGGAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCAACTTCCCAAGCCTTAGGTGGCCACCAAAATGCTCACAAACGAGAGCGCCAACATGCCAAACGAGCCCACCTTCACATGTCTGAAGCTCAAGTCTATAGCCTTGTCAACTACAGGCCTTTCACTTCTCCAACTTCAACTACGTTAACCACCCCAATGCCTGGTACTACTTACCCAACTTCTTCTGCTAGGTTTTATGGAAGCCCATATCCTCGTCACCACCACAATCCCATCAATGGAAGCCCCTTGGCCTTGTGGCGAATCCCCACCCTCCAAACTAACCCTACTTTCAATAATCGCGACCGTTCGTTGAATCCATTGCCCTCGTTTGACGGCGACGATGTCAAGAACAACATGAGGGCCTCGTCGCTGCAGCTTGCGGCTAGGTCTGCTTCACCGTTGCAAAACCGGTACGTCGTCCATGACTCCAAACCCGGTGTCCAGGACCATGTGAGTTTGGATCTTCATCTGTAA 747 0.5154 MDKASETSSRETHDFMNVDSFSQLPFIRPSPLTKEKPIKLFGIEFASPEATATATVQPADDSESAEDSSGGKDNSSETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHMSEAQVYSLVNYRPFTSPTSTTLTTPMPGTTYPTSSARFYGSPYPRHHHNPINGSPLALWRIPTLQTNPTFNNRDRSLNPLPSFDGDDVKNNMRASSLQLAARSASPLQNRYVVHDSKPGVQDHVSLDLHL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02033 248 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Accr5g02033 248 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Accr5g02033 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Accr5g02033 248 MobiDBLite consensus disorder prediction 1 30 - -
Accr5g02033 248 MobiDBLite consensus disorder prediction 51 78 - -
Accr5g02033 248 PANTHER ZINC FINGER PROTEIN GIS 1 248 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02033 Accr-Chr5 46684244 46684990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02033 1 248 C2H2 Transcription Factor Family AT3G58070 39.630 6.58e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02033 - - pcin:129307200 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02514 2 60577204 60577980 Accr5g02033 5 46684244 46684990 CCT
Accr5g02033 5 46684244 46684990 Accr5g02033 5 46684244 46684990 ECH